Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 APOOP1-201ENST00000604695 592 ntBASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 AC103810.6-201ENST00000606708 136 ntBASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 AC135803.1-201ENST00000608748 565 ntBASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 CU459211.1-201ENST00000635667 749 ntBASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 MTND5P28-201ENST00000438005 1594 ntBASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 AL109809.4-201ENST00000603520 2185 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 ZNF833P-201ENST00000424938 1494 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 SNORA67.4-201ENST00000384688 142 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 PRRC2CP1-201ENST00000404428 159 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 RNA5SP56-201ENST00000410277 118 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 MTCO1P39-201ENST00000426148 480 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 AC018634.1-201ENST00000437554 401 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 AL672167.3-201ENST00000465951 960 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 RN7SKP96-201ENST00000516948 297 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 IGKV2D-36-201ENST00000518643 226 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 MTCYBP20-201ENST00000524239 1129 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 AC087481.2-201ENST00000565492 330 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 AC090751.1-201ENST00000566966 267 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 OR4K7P-201ENST00000580232 945 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 MIR5007-201ENST00000583098 95 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 AC046143.2-201ENST00000609789 160 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 AC009831.4-201ENST00000620744 325 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 AL360181.4-201ENST00000621752 134 ntBASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COMMD3Q9UBI1 Z99496.1-201ENST00000469424 1477 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 MIR34A-201ENST00000385130 110 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AC005005.2-201ENST00000420779 380 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 HSFY1P1-201ENST00000423928 1178 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 SDR42E1P3-201ENST00000438345 502 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 ARL5AP3-201ENST00000439327 386 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AL591719.1-201ENST00000444669 744 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 RN7SKP132-201ENST00000516001 208 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 OR10V3P-201ENST00000525712 725 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 POLR2KP1-201ENST00000553226 168 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AMZ2P1-203ENST00000565833 850 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AC009127.3-201ENST00000570531 403 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AL669831.4-202ENST00000590817 238 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AL355810.1-201ENST00000614629 552 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AC245884.12-201ENST00000615364 59 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 AC110079.1-202ENST00000635213 138 ntBASIC1.9□□□□□ -2.11
COMMD3Q9UBI1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 AC004944.1-201ENST00000517807 3059 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 RNU6-263P-201ENST00000363811 107 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 SET-203ENST00000372688 801 ntTSL 2 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 RN7SKP27-201ENST00000410684 333 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 OFD1P18Y-201ENST00000420889 959 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 OR6C71P-201ENST00000432580 913 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 AC022493.1-201ENST00000492984 337 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 CAB39P1-201ENST00000502277 460 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 AC008427.1-201ENST00000503102 655 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 SNORA31.8-201ENST00000516327 108 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms