Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CNTN3Q9P232 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
CNTN3Q9P232 ZNF519P1-201ENST00000449011 1626 ntBASIC5.56□□□□□ -1.52
CNTN3Q9P232 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CNTN3Q9P232 AC116667.1-201ENST00000604855 2072 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 ZNF33CP-201ENST00000432492 2030 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CNTN3Q9P232 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNTN3Q9P232 RNU6-1115P-201ENST00000362490 106 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 RN7SKP104-201ENST00000362605 328 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 Y_RNA.193-201ENST00000363979 102 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 RN7SKP224-201ENST00000364140 325 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 RNU6-328P-201ENST00000390887 106 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 RNU6-550P-201ENST00000391057 101 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 MIR450B-201ENST00000401182 78 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 AL109755.1-201ENST00000401791 649 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 RNA5SP296-201ENST00000410523 111 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 RPL30P2-201ENST00000414021 291 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 GJA6P-201ENST00000415117 1042 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 RPS27P18-201ENST00000431701 247 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 RHOT1P3-201ENST00000436571 331 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 AC104058.1-201ENST00000448028 297 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 AL162388.1-201ENST00000450912 352 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 MIR2053-201ENST00000459295 91 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 RPL21P93-201ENST00000480465 489 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 AC015911.1-201ENST00000495111 156 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 RPL23AP55-201ENST00000498163 452 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 AC008526.1-201ENST00000509149 338 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 AC108078.2-201ENST00000510750 236 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 RANP3-201ENST00000530970 276 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 AC106782.4-201ENST00000568264 210 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 AC010653.1-201ENST00000571108 881 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 MIR4691-201ENST00000583764 85 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 AL355812.1-201ENST00000603215 216 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 AL669831.3-213ENST00000636676 183 ntBASIC5.55□□□□□ -1.52
CNTN3Q9P232 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNTN3Q9P232 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNTN3Q9P232 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
CNTN3Q9P232 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTN3Q9P232 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 ADAM5-202ENST00000399789 1942 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNTN3Q9P232 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTN3Q9P232 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTN3Q9P232 SNORD3E-201ENST00000362899 217 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 OR1L6-202ENST00000373684 1044 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 Y_RNA.646-201ENST00000410980 101 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC114482.1-201ENST00000418010 247 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC009238.2-201ENST00000431026 355 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 RPL34P20-201ENST00000442771 351 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 PTMAP3-201ENST00000447474 330 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC053481.1-201ENST00000467217 306 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC098976.1-201ENST00000513014 541 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 RNU6-27P-201ENST00000516146 107 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 FTH1P11-201ENST00000517577 551 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC040958.1-201ENST00000561102 201 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 MTCO3P23-201ENST00000561363 289 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNTN3Q9P232 MIR3941-201ENST00000582572 103 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AL670379.6-201ENST00000603753 252 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC006363.1-201ENST00000603806 463 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AC008162.1-201ENST00000604718 254 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AL670379.1-201ENST00000604752 252 ntBASIC5.54□□□□□ -1.52
CNTN3Q9P232 AL670379.5-201ENST00000605253 252 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms