Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 BNIP3P33-201ENST00000598912 569 ntBASIC3.81□□□□□ -1.8
HCN3Q9P1Z3 AC068790.3-201ENST00000602988 553 ntBASIC3.81□□□□□ -1.8
HCN3Q9P1Z3 AP001330.4-201ENST00000604350 154 ntBASIC3.81□□□□□ -1.8
HCN3Q9P1Z3 AC012603.1-201ENST00000606424 528 ntBASIC3.81□□□□□ -1.8
HCN3Q9P1Z3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.81□□□□□ -1.8
HCN3Q9P1Z3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.81□□□□□ -1.8
HCN3Q9P1Z3 MIR6875-201ENST00000617506 72 ntBASIC3.81□□□□□ -1.8
HCN3Q9P1Z3 AL353748.2-201ENST00000622148 471 ntBASIC3.81□□□□□ -1.8
HCN3Q9P1Z3 MIR6500-201ENST00000622700 86 ntBASIC3.81□□□□□ -1.8
HCN3Q9P1Z3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.81□□□□□ -1.8
HCN3Q9P1Z3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HCN3Q9P1Z3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.81□□□□□ -1.8
HCN3Q9P1Z3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HCN3Q9P1Z3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC021755.1-201ENST00000559747 1447 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 MAPK10-373ENST00000641983 6772 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 RNU6-173P-201ENST00000364215 104 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 PPIAP31-201ENST00000405422 495 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 Y_RNA.598-201ENST00000410480 95 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 RNU6-516P-201ENST00000411381 104 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC078974.1-201ENST00000411597 223 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC233728.2-201ENST00000425348 757 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC099563.1-201ENST00000456086 418 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 UBDP1-202ENST00000457888 382 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 RNU6-956P-201ENST00000458868 103 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 RNA5SP269-201ENST00000459032 137 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 RPS3AP50-201ENST00000487064 803 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC025554.1-201ENST00000505641 188 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 SNRPGP16-201ENST00000533275 226 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC125611.2-201ENST00000551907 647 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AL049634.3-201ENST00000604968 457 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC024941.1-201ENST00000612250 334 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC025594.3-201ENST00000613068 790 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AL590240.3-201ENST00000621416 943 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC009268.2-201ENST00000621925 457 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC008785.1-201ENST00000624475 456 ntBASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.8□□□□□ -1.8
HCN3Q9P1Z3 USP8P1-201ENST00000494673 3183 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 FGF7P2-201ENST00000332473 296 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 Y_RNA.51-201ENST00000362725 102 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 RNU6-637P-201ENST00000384050 107 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 RNU1-89P-201ENST00000384592 164 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 BTF3L4P1-201ENST00000413813 468 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 CYP4F29P-201ENST00000420685 446 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 MTCO1P39-201ENST00000426148 480 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 MTND1P28-201ENST00000435623 950 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 TPT1P14-201ENST00000448018 505 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 PDSS1P2-201ENST00000449397 678 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 VN1R105P-201ENST00000486595 910 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 NPM1P41-201ENST00000512920 831 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 IGKV2D-23-201ENST00000518179 286 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AC006362.1-201ENST00000567392 174 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AC007599.1-201ENST00000568688 1174 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AL606490.9-201ENST00000603331 271 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms