Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.61□□□□□ -1.83
HMG20BQ9P0W2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AC010733.2-201ENST00000589496 5702 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 DEFB109C-201ENST00000382575 264 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 DEFB109B-201ENST00000382656 264 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 U3.29-201ENST00000391296 212 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AL355143.1-201ENST00000407101 841 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AC012497.1-201ENST00000429392 575 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AC112492.1-201ENST00000449607 712 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 PRELID3BP6-201ENST00000503839 571 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AC006390.1-201ENST00000508068 283 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AC010460.2-201ENST00000509054 677 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 RNU1-61P-201ENST00000516107 151 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 RNU6-27P-201ENST00000516146 107 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 RPL12P22-201ENST00000519073 490 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AC055876.5-201ENST00000605667 259 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 CYCSP41-201ENST00000616920 296 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AC091925.2-201ENST00000625059 256 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 AL138960.2-201ENST00000625145 535 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 MTCO1P23-201ENST00000415223 1526 ntBASIC3.6□□□□□ -1.83
HMG20BQ9P0W2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 U3.26-201ENST00000391236 204 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 AC022018.1-201ENST00000430685 241 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 RNF2P1-201ENST00000442955 1010 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 AL135938.1-201ENST00000443141 297 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 NECAP1P2-201ENST00000455668 727 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 PNPLA4P1-201ENST00000458328 305 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 AC012181.1-201ENST00000479895 423 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 AC093752.1-206ENST00000511823 336 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 AC026412.2-201ENST00000512270 1075 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 RNU6-1261P-201ENST00000517194 104 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 AC010376.1-201ENST00000522101 334 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 AC118942.1-201ENST00000529674 1035 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 AC010198.2-201ENST00000550612 259 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 SNORD84-203ENST00000584275 78 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 AL022067.1-201ENST00000602426 454 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 AC096947.1-201ENST00000603233 470 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 AC009237.15-201ENST00000610252 501 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 AL390240.1-201ENST00000612950 384 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.59□□□□□ -1.83
HMG20BQ9P0W2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.59□□□□□ -1.84
HMG20BQ9P0W2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 Y_RNA.25-201ENST00000362528 102 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 MIR634-201ENST00000385208 97 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 RNU4-65P-201ENST00000410473 140 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 RNU2-15P-201ENST00000410692 191 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 AC092447.6-201ENST00000414578 210 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 SSXP4-201ENST00000451349 245 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 RPL23AP44-201ENST00000482216 473 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 RNU6-276P-201ENST00000516114 96 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 SNORA19.3-201ENST00000516165 130 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 EEF1B2P4-201ENST00000551398 348 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 AL163153.1-201ENST00000554223 283 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 LARP7P2-201ENST00000575306 125 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 MIR3912-201ENST00000577566 105 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 AL606834.3-201ENST00000602615 496 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 AC015871.2-201ENST00000603605 948 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 MKKS-204ENST00000639674 192 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 AC021755.1-201ENST00000559747 1447 ntBASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.58□□□□□ -1.84
HMG20BQ9P0W2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms