Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC234064.1-201ENST00000436312 247 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 AC004866.2-201ENST00000438285 481 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.58□□□□□ -2
VAPAQ9P0L0 SNRPGP6-201ENST00000451124 220 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.58□□□□□ -2
VAPAQ9P0L0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.58□□□□□ -2
VAPAQ9P0L0 RPS29P26-201ENST00000477483 171 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 AC090525.1-201ENST00000479116 478 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 AC084024.2-201ENST00000503480 791 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 AC117522.3-201ENST00000507974 584 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.58□□□□□ -2
VAPAQ9P0L0 RNU6-826P-201ENST00000516827 104 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.58□□□□□ -2
VAPAQ9P0L0 AP002404.1-201ENST00000532005 451 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.58□□□□□ -2
VAPAQ9P0L0 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.58□□□□□ -2
VAPAQ9P0L0 MTCO1P40-201ENST00000574371 625 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.58□□□□□ -2
VAPAQ9P0L0 AC008739.3-201ENST00000603262 127 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 AL022099.1-201ENST00000604551 712 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.58□□□□□ -2
VAPAQ9P0L0 AL138880.2-201ENST00000616214 239 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.58□□□□□ -2
VAPAQ9P0L0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
VAPAQ9P0L0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.58□□□□□ -2
VAPAQ9P0L0 AC091564.4-201ENST00000533934 2194 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.57□□□□□ -2
VAPAQ9P0L0 SNORA38.1-201ENST00000364172 131 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
VAPAQ9P0L0 SNORA51.6-201ENST00000384151 125 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 MIR7-3-201ENST00000384898 110 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 AL139095.1-201ENST00000404326 391 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 FCF1P2-201ENST00000415284 583 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 YME1L1P1-201ENST00000429435 297 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 AL512661.1-201ENST00000434586 1253 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 RPS20P5-201ENST00000434808 360 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
VAPAQ9P0L0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.57□□□□□ -2
VAPAQ9P0L0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.57□□□□□ -2
VAPAQ9P0L0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.57□□□□□ -2
VAPAQ9P0L0 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.57□□□□□ -2
VAPAQ9P0L0 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.57□□□□□ -2
VAPAQ9P0L0 FTH1P2-201ENST00000466086 412 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 SEM1P1-201ENST00000506694 209 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 RAC1P5-201ENST00000512182 576 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 SNORA70.16-201ENST00000516390 95 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VAPAQ9P0L0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.57□□□□□ -2
VAPAQ9P0L0 ARL2BPP5-201ENST00000523141 481 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.57□□□□□ -2
VAPAQ9P0L0 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.57□□□□□ -2
VAPAQ9P0L0 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.57□□□□□ -2
VAPAQ9P0L0 MIR4444-1-201ENST00000581696 74 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 MIR4444-2-201ENST00000584390 74 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 AL133507.1-201ENST00000605269 557 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 AC069200.1-201ENST00000609511 323 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 ATP5A1P2-202ENST00000616464 443 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 AC007275.1-201ENST00000621243 671 ntBASIC2.57□□□□□ -2
VAPAQ9P0L0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VAPAQ9P0L0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.57□□□□□ -2
VAPAQ9P0L0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
VAPAQ9P0L0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
VAPAQ9P0L0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.56□□□□□ -2
VAPAQ9P0L0 MIR422A-201ENST00000362286 90 ntBASIC2.56□□□□□ -2
VAPAQ9P0L0 RNU6-582P-201ENST00000362989 107 ntBASIC2.56□□□□□ -2
VAPAQ9P0L0 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VAPAQ9P0L0 SNORD116-23-201ENST00000384645 92 ntBASIC2.56□□□□□ -2
VAPAQ9P0L0 AL136372.1-201ENST00000403060 228 ntBASIC2.56□□□□□ -2
VAPAQ9P0L0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.56□□□□□ -2
VAPAQ9P0L0 AL590762.3-201ENST00000436372 640 ntBASIC2.56□□□□□ -2
VAPAQ9P0L0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.56□□□□□ -2
VAPAQ9P0L0 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.56□□□□□ -2
VAPAQ9P0L0 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.56□□□□□ -2
VAPAQ9P0L0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.56□□□□□ -2
VAPAQ9P0L0 SETP12-201ENST00000514068 805 ntBASIC2.56□□□□□ -2
VAPAQ9P0L0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.56□□□□□ -2
VAPAQ9P0L0 RNU6-885P-201ENST00000516607 104 ntBASIC2.56□□□□□ -2
VAPAQ9P0L0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.56□□□□□ -2
VAPAQ9P0L0 AP000867.2-201ENST00000532468 320 ntBASIC2.56□□□□□ -2
VAPAQ9P0L0 AP000787.2-201ENST00000604432 568 ntBASIC2.56□□□□□ -2
VAPAQ9P0L0 AC019159.1-201ENST00000605094 187 ntBASIC2.56□□□□□ -2
VAPAQ9P0L0 AC008277.2-201ENST00000605196 797 ntBASIC2.56□□□□□ -2
VAPAQ9P0L0 AL159169.3-201ENST00000608871 561 ntBASIC2.56□□□□□ -2
VAPAQ9P0L0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.56□□□□□ -2
VAPAQ9P0L0 AC008083.4-201ENST00000615076 444 ntBASIC2.56□□□□□ -2
VAPAQ9P0L0 AC003001.2-201ENST00000616294 831 ntBASIC2.56□□□□□ -2
VAPAQ9P0L0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.56□□□□□ -2
VAPAQ9P0L0 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VAPAQ9P0L0 AC016769.3-201ENST00000396562 315 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 NPM1P10-201ENST00000398310 865 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 MTCO2P31-201ENST00000402702 684 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 FO393413.1-201ENST00000402892 195 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 RPS20P25-201ENST00000412447 352 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.55□□□□□ -2
VAPAQ9P0L0 AL645937.1-202ENST00000421799 937 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 HMGN2P30-201ENST00000423237 256 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 AL512649.1-201ENST00000428997 581 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 GDI2P1-201ENST00000429312 1336 ntBASIC2.55□□□□□ -2
VAPAQ9P0L0 EZH2P1-201ENST00000431167 291 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms