Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DDX56Q9NY93 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DDX56Q9NY93 AL133270.1-201ENST00000402635 279 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 RPS23P10-201ENST00000416185 486 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 PIGFP2-201ENST00000421400 651 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 AL590762.4-201ENST00000425885 253 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 USP9YP9-201ENST00000429406 715 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
DDX56Q9NY93 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 ABCF2P2-201ENST00000450549 296 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 NANOGP10-201ENST00000453325 895 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 HMGN2P7-201ENST00000456186 273 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 AC010631.1-201ENST00000474150 156 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 AL049874.1-201ENST00000489560 388 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
DDX56Q9NY93 AC006499.6-201ENST00000511169 607 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 AC087883.1-201ENST00000551882 391 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
DDX56Q9NY93 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 AC005951.1-201ENST00000576706 485 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 MIR4293-201ENST00000584305 78 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 RPL26P30-202ENST00000602923 645 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 AC012531.5-201ENST00000611375 151 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 AC091953.3-201ENST00000623220 236 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DDX56Q9NY93 AC090740.1-201ENST00000623193 2262 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DDX56Q9NY93 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
DDX56Q9NY93 AF117829.1-206ENST00000621883 3802 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
DDX56Q9NY93 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
DDX56Q9NY93 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
DDX56Q9NY93 PRO1804-201ENST00000623780 2050 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
DDX56Q9NY93 OR4K15-201ENST00000305051 1216 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 MIR514A1-201ENST00000385133 98 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 RPS3AP36-201ENST00000398190 775 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 AL359634.1-202ENST00000404721 284 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 RBMY1KP-201ENST00000423480 476 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 AC093270.2-201ENST00000486157 792 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 KCTD9P5-201ENST00000504141 1170 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 RN7SKP13-201ENST00000515933 244 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 SCARNA15.2-201ENST00000516409 127 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 RNU7-51P-201ENST00000516560 62 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 RNU6-430P-201ENST00000517078 107 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 AC051619.2-201ENST00000559063 397 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 HSPE1P5-201ENST00000561489 272 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 MIR3913-1-201ENST00000577744 102 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.57□□□□□ -1.68
DDX56Q9NY93 AL670379.6-201ENST00000603753 252 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 AC079587.1-201ENST00000603846 277 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 AL670379.11-201ENST00000604059 253 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 AC008162.1-201ENST00000604718 254 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 AL670379.1-201ENST00000604752 252 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 AP000860.1-201ENST00000605250 559 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 AL670379.5-201ENST00000605253 252 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 AL670379.12-201ENST00000605291 253 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 AL670379.8-201ENST00000605353 252 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 AL670379.7-201ENST00000605823 252 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 AL049539.1-201ENST00000611964 459 ntBASIC4.57□□□□□ -1.68
DDX56Q9NY93 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
DDX56Q9NY93 AC244100.1-202ENST00000621554 382 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms