Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC008065.1-201ENST00000428525 348 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AL035407.1-201ENST00000429211 571 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 ZYG11AP1-201ENST00000430329 837 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 ZNF114P1-201ENST00000453500 292 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 MTCO3P11-201ENST00000455103 774 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 MEMO1P3-201ENST00000459811 302 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AC146507.2-201ENST00000460608 476 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AC012181.1-201ENST00000479895 423 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 HIGD1AP3-201ENST00000515857 278 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 RNU1-143P-201ENST00000516296 146 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 SNORA31.9-201ENST00000516429 84 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AC239860.2-201ENST00000525886 270 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 OR4T1P-201ENST00000554933 911 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 MIR4637-201ENST00000582405 84 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 BNIP3P33-201ENST00000598912 569 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AL606490.9-201ENST00000603331 271 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AL596327.1-201ENST00000603629 213 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AC105129.3-201ENST00000605455 485 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 U1.23-201ENST00000610293 146 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 RNU1-68P-201ENST00000615382 146 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AC068831.8-201ENST00000620171 435 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 U1.39-201ENST00000621562 146 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AL356274.2-201ENST00000624379 3752 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 MTND4P16-201ENST00000466108 1367 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AL122126.1-201ENST00000546905 1318 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 TPMTP3-201ENST00000411928 735 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 NPM1P11-201ENST00000417106 855 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AC019178.2-201ENST00000423595 505 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 OR2AS1P-201ENST00000427827 319 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AC004975.1-201ENST00000428733 208 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AC244505.4-201ENST00000434905 287 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 MTCYBP39-201ENST00000437562 491 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 TRIM60P18-201ENST00000441518 828 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 SSXP5-201ENST00000443473 287 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AC073387.1-201ENST00000453261 709 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AC026410.2-201ENST00000460281 156 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AL133162.1-201ENST00000463228 453 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 RPL30P9-201ENST00000465586 330 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 PABPC1P3-201ENST00000469174 459 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 SETP11-201ENST00000473027 690 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AC093767.1-201ENST00000504523 156 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 POU5F1P7-201ENST00000508759 541 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 PTGES3P3-201ENST00000511479 482 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 FTH1P21-201ENST00000512179 511 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 OR4A45P-201ENST00000529954 901 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 ROCK1P1-201ENST00000573767 549 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AC005951.1-201ENST00000576706 485 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AC023575.1-201ENST00000580510 358 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 SNORD39.4-201ENST00000620099 78 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AC009318.4-201ENST00000620496 486 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 FP236240.3-201ENST00000623061 327 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 AC099063.3-201ENST00000642066 185 ntBASIC3.28□□□□□ -1.88
NDE1Q9NXR1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NDE1Q9NXR1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.28□□□□□ -1.89
NDE1Q9NXR1 AL079343.1-201ENST00000572358 1771 ntBASIC3.28□□□□□ -1.89
NDE1Q9NXR1 OR4G11P-202ENST00000642116 1414 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 ZNF33CP-201ENST00000432492 2030 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AL079305.1-201ENST00000623159 3008 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 FRG1CP-201ENST00000358464 769 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms