Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 MIR1273E-201ENST00000581165 102 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 AC008521.1-201ENST00000587471 187 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 AL355877.2-201ENST00000603670 358 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 AC064801.1-201ENST00000612025 407 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 AL139811.1-201ENST00000424779 2299 ntBASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CUEDC1Q9NWM3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AC093671.1-201ENST00000624981 2929 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 SELENOWP1-201ENST00000322792 252 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 RNA5SP273-201ENST00000362484 113 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 Y_RNA.65-201ENST00000362846 100 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 Y_RNA.83-201ENST00000363005 113 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 RNU6-596P-201ENST00000365395 98 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 RNU6-81P-201ENST00000365608 104 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 DBIP1-201ENST00000401435 260 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 MYL6P5-201ENST00000412707 459 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 MRPS21P2-201ENST00000424704 264 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AL360081.1-201ENST00000428299 555 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 CKS1BP5-201ENST00000434172 273 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AL445928.1-201ENST00000435545 222 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 RPL29P29-201ENST00000448725 423 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 RPL36AP13-201ENST00000457490 317 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 RN7SL610P-201ENST00000463845 291 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 RPS26P39-201ENST00000469206 341 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AC092865.4-201ENST00000477936 615 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 RPL21P103-201ENST00000479921 488 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AC012339.2-201ENST00000523996 453 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 CBX3P4-201ENST00000538909 354 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AL133153.1-201ENST00000557756 303 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 MIR4700-201ENST00000578311 74 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 BMS1P21-201ENST00000634565 365 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 THAP12P9-201ENST00000503971 2360 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 AL672167.1-205ENST00000641112 3080 ntBASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CUEDC1Q9NWM3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 AL078621.3-201ENST00000623707 2042 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 AL391987.6-201ENST00000305671 199 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 RNA5SP477-201ENST00000362639 119 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 Y_RNA.84-201ENST00000363011 104 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 MIR1298-201ENST00000408783 112 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 RPL23AP38-201ENST00000423801 469 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 UBE2V1P4-201ENST00000425374 344 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 AC099677.3-201ENST00000427081 395 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 AL158071.1-201ENST00000430315 461 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 RPS12P17-201ENST00000438591 377 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms