Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 NECAP1P2-201ENST00000455668 727 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 RPS4XP10-201ENST00000465034 731 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 ST13P14-201ENST00000474095 734 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 MTCYBP35-201ENST00000503630 1137 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AC021678.1-201ENST00000505195 936 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 RNU5A-4P-201ENST00000516588 111 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 HIGD1AP10-201ENST00000527837 282 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AC126177.3-201ENST00000551839 688 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 VN1R82P-201ENST00000601481 356 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AC012669.1-201ENST00000603209 283 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AC006270.3-201ENST00000605967 1036 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AC090425.2-201ENST00000608818 501 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AC087683.2-201ENST00000611384 326 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AL596245.1-201ENST00000618994 362 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AL356321.1-201ENST00000621360 228 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 AL356585.4-201ENST00000623078 1229 ntBASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SMC4Q9NTJ3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 RN7SKP285-201ENST00000410137 318 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 RPS24P7-201ENST00000416921 246 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AC097713.2-201ENST00000430199 356 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 RPS25P9-201ENST00000435591 252 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AC005019.1-201ENST00000436455 431 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 MUPP-201ENST00000438111 566 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 MTND3P1-201ENST00000441336 220 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 Z82190.1-201ENST00000454534 490 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 RNU7-136P-201ENST00000458819 69 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AC096751.1-202ENST00000502691 1067 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AC034244.1-201ENST00000507687 207 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AL845331.3-202ENST00000562856 261 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AC009097.3-201ENST00000563557 1018 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AC112220.3-201ENST00000605502 502 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AC140725.3-201ENST00000616193 880 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AC009159.2-201ENST00000617603 606 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 SNORD39.4-201ENST00000620099 78 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AL360181.4-201ENST00000621752 134 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 AC007496.3-201ENST00000624987 3443 ntBASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMC4Q9NTJ3 ZNF542P-204ENST00000482727 1305 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AP001148.1-201ENST00000624124 2359 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 FAM133CP-201ENST00000332869 704 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 RNA5SP72-201ENST00000364442 117 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AL031679.1-201ENST00000400616 525 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AC007390.1-201ENST00000415722 356 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 XKRYP1-201ENST00000423438 492 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 DUTP6-201ENST00000425573 462 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 XKRYP2-201ENST00000432915 492 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 HMGB1P12-201ENST00000438594 598 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 PRDX3P3-201ENST00000447765 522 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 RN7SKP287-201ENST00000516546 266 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AC105185.1-201ENST00000518705 535 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AC093331.1-201ENST00000521474 169 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AC024224.1-201ENST00000538284 609 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AC061975.8-201ENST00000587058 721 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AC024220.1-201ENST00000603675 484 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AC093424.1-201ENST00000604999 338 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms