Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 CTHRC1P1-201ENST00000605383 469 ntBASIC5.78□□□□□ -1.48
ATG3Q9NT62 RNU6-87P-201ENST00000607561 108 ntBASIC5.78□□□□□ -1.48
ATG3Q9NT62 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG3Q9NT62 AC093913.1-201ENST00000614178 329 ntBASIC5.78□□□□□ -1.48
ATG3Q9NT62 uc_338.13-201ENST00000618243 179 ntBASIC5.78□□□□□ -1.48
ATG3Q9NT62 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG3Q9NT62 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG3Q9NT62 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG3Q9NT62 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
ATG3Q9NT62 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.78□□□□□ -1.48
ATG3Q9NT62 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG3Q9NT62 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATG3Q9NT62 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
ATG3Q9NT62 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.48
ATG3Q9NT62 AL158163.1-201ENST00000603915 1649 ntBASIC5.77□□□□□ -1.48
ATG3Q9NT62 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG3Q9NT62 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
ATG3Q9NT62 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATG3Q9NT62 AC005332.5-201ENST00000591222 2919 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.77□□□□□ -1.49
ATG3Q9NT62 SPRR2C-201ENST00000290702 219 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 AC067945.1-201ENST00000342609 618 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ATG3Q9NT62 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATG3Q9NT62 MIR1305-201ENST00000408300 86 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 MIR320C1-201ENST00000408566 88 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 GSTM3P2-201ENST00000412746 530 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 MTCO2P27-201ENST00000420740 428 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG3Q9NT62 AL132765.1-201ENST00000434165 553 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 RPL23AP52-201ENST00000439311 478 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 SUMO1P3-201ENST00000439961 304 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 BNIP3P2-201ENST00000441221 577 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 RPS7P5-201ENST00000441482 581 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.77□□□□□ -1.49
ATG3Q9NT62 CACYBPP2-201ENST00000453625 678 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 RPL23AP71-201ENST00000470966 469 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 AL135752.1-201ENST00000479477 471 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 AC020890.1-201ENST00000491837 504 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 RN7SL691P-201ENST00000494487 301 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 AC105417.1-201ENST00000514691 285 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 RNU6-559P-201ENST00000516151 98 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.77□□□□□ -1.49
ATG3Q9NT62 SUB1P1-201ENST00000524415 382 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 COPS8P3-201ENST00000526024 482 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ATG3Q9NT62 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG3Q9NT62 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG3Q9NT62 RN7SL600P-201ENST00000581811 299 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.77□□□□□ -1.49
ATG3Q9NT62 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 MIR92B-201ENST00000607575 96 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 AL355816.1-201ENST00000607951 118 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 AC022106.2-201ENST00000620114 757 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 AC009161.2-201ENST00000624626 138 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG3Q9NT62 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG3Q9NT62 RIOK3P1-201ENST00000418778 1528 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATG3Q9NT62 ERCC6-202ENST00000374127 1782 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 A2MP1-204ENST00000566278 4130 ntBASIC5.77□□□□□ -1.49
ATG3Q9NT62 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
ATG3Q9NT62 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
ATG3Q9NT62 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG3Q9NT62 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG3Q9NT62 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG3Q9NT62 LINC00561-201ENST00000565815 2738 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 AC008079.2-201ENST00000623543 20396 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG3Q9NT62 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG3Q9NT62 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
ATG3Q9NT62 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
ATG3Q9NT62 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG3Q9NT62 NACAP2-201ENST00000318548 624 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 RNU6-289P-201ENST00000364093 107 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG3Q9NT62 RNU6-1106P-201ENST00000390845 107 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 SNORA11F-201ENST00000408237 128 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 RNA5SP296-201ENST00000410523 111 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 RNU4-14P-201ENST00000410858 122 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 BEND7P1-201ENST00000422058 457 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG3Q9NT62 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG3Q9NT62 MTND2P29-201ENST00000438595 412 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG3Q9NT62 AC233702.1-201ENST00000482905 502 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 EIF4EP3-201ENST00000498782 656 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 HMGB3P15-201ENST00000507326 574 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 AC034159.1-201ENST00000513885 583 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 Vault.3-201ENST00000516676 95 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 SNORD60.2-201ENST00000516883 86 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 AP003122.3-201ENST00000526316 255 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG3Q9NT62 AC018552.3-201ENST00000567416 561 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 MIR3167-201ENST00000579623 85 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 MIR4429-201ENST00000580105 73 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
ATG3Q9NT62 DPPA3P3-201ENST00000603842 430 ntBASIC5.76□□□□□ -1.49
ATG3Q9NT62 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG3Q9NT62 AL365434.2-201ENST00000607979 234 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms