Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC008277.2-201ENST00000605196 797 ntBASIC2.73□□□□□ -1.97
TREX1Q9NSU2 RPL23AP88-201ENST00000605759 454 ntBASIC2.73□□□□□ -1.97
TREX1Q9NSU2 AC026741.1-201ENST00000605892 482 ntBASIC2.73□□□□□ -1.97
TREX1Q9NSU2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.73□□□□□ -1.97
TREX1Q9NSU2 LRRC77P-213ENST00000637727 880 ntBASIC2.73□□□□□ -1.97
TREX1Q9NSU2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TREX1Q9NSU2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TREX1Q9NSU2 AC111188.2-201ENST00000529697 1387 ntBASIC2.73□□□□□ -1.97
TREX1Q9NSU2 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
TREX1Q9NSU2 AC138915.1-201ENST00000565427 1685 ntBASIC2.73□□□□□ -1.97
TREX1Q9NSU2 AC011460.1-201ENST00000636268 1834 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AC099654.7-201ENST00000635788 2127 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.72□□□□□ -1.97
TREX1Q9NSU2 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
TREX1Q9NSU2 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TREX1Q9NSU2 RNU1-112P-201ENST00000364401 164 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 Y_RNA.333-201ENST00000365274 102 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.72□□□□□ -1.97
TREX1Q9NSU2 SNORA1.3-201ENST00000384676 136 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 MIR483-201ENST00000385070 76 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 MIR16-1-201ENST00000385271 89 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AL023807.1-201ENST00000407932 359 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AL592148.1-201ENST00000413568 445 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AC234064.1-201ENST00000436312 247 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AC004022.1-201ENST00000447766 1066 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 RPL23AP20-201ENST00000447965 421 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TREX1Q9NSU2 CDC42P1-201ENST00000456658 548 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 SETP6-201ENST00000479329 568 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AC080014.1-201ENST00000496877 1201 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 GMPSP1-201ENST00000514075 579 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AC126177.3-201ENST00000551839 688 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AC125611.2-201ENST00000551907 647 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AC023043.3-201ENST00000593113 385 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AC019159.1-201ENST00000605094 187 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AL133507.1-201ENST00000605269 557 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AL627309.6-201ENST00000606857 840 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AC006329.2-201ENST00000611491 394 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AL138880.2-201ENST00000616214 239 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.72□□□□□ -1.97
TREX1Q9NSU2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.72□□□□□ -1.97
TREX1Q9NSU2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.72□□□□□ -1.97
TREX1Q9NSU2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
TREX1Q9NSU2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TREX1Q9NSU2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.72□□□□□ -1.97
TREX1Q9NSU2 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TREX1Q9NSU2 RNU6-821P-201ENST00000390995 107 ntBASIC2.71□□□□□ -1.98
TREX1Q9NSU2 FO393413.1-201ENST00000402892 195 ntBASIC2.71□□□□□ -1.98
TREX1Q9NSU2 RNA5SP21-201ENST00000410917 96 ntBASIC2.71□□□□□ -1.98
TREX1Q9NSU2 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.71□□□□□ -1.98
TREX1Q9NSU2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.71□□□□□ -1.98
TREX1Q9NSU2 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.71□□□□□ -1.98
TREX1Q9NSU2 DEFB130D-201ENST00000426866 237 ntBASIC2.71□□□□□ -1.98
TREX1Q9NSU2 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.71□□□□□ -1.98
TREX1Q9NSU2 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.71□□□□□ -1.98
TREX1Q9NSU2 AL590762.3-201ENST00000436372 640 ntBASIC2.71□□□□□ -1.98
TREX1Q9NSU2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.71□□□□□ -1.98
TREX1Q9NSU2 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.71□□□□□ -1.98
TREX1Q9NSU2 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.71□□□□□ -1.98
TREX1Q9NSU2 COL6A4P2-205ENST00000509855 506 ntBASIC2.71□□□□□ -1.98
TREX1Q9NSU2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.71□□□□□ -1.98
TREX1Q9NSU2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.71□□□□□ -1.98
TREX1Q9NSU2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.71□□□□□ -1.98
TREX1Q9NSU2 AC087373.1-201ENST00000524920 491 ntBASIC2.71□□□□□ -1.98
TREX1Q9NSU2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.71□□□□□ -1.98
TREX1Q9NSU2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.71□□□□□ -1.98
TREX1Q9NSU2 AC090695.1-201ENST00000561269 1222 ntBASIC2.71□□□□□ -1.98
TREX1Q9NSU2 AC133794.1-201ENST00000602731 914 ntBASIC2.71□□□□□ -1.98
TREX1Q9NSU2 MIR8084-201ENST00000614105 89 ntBASIC2.71□□□□□ -1.98
TREX1Q9NSU2 AC073348.1-201ENST00000623002 331 ntBASIC2.71□□□□□ -1.98
TREX1Q9NSU2 AC130650.2-201ENST00000618736 2403 ntBASIC2.71□□□□□ -1.98
TREX1Q9NSU2 ZNF849P-201ENST00000594711 1566 ntBASIC2.7□□□□□ -1.98
TREX1Q9NSU2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.7□□□□□ -1.98
TREX1Q9NSU2 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
TREX1Q9NSU2 RNU6-525P-201ENST00000363685 104 ntBASIC2.7□□□□□ -1.98
TREX1Q9NSU2 OR1L1-202ENST00000373686 1083 ntBASIC2.7□□□□□ -1.98
TREX1Q9NSU2 AL121978.1-201ENST00000402778 359 ntBASIC2.7□□□□□ -1.98
TREX1Q9NSU2 PTGES3P2-201ENST00000407942 482 ntBASIC2.7□□□□□ -1.98
TREX1Q9NSU2 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.7□□□□□ -1.98
TREX1Q9NSU2 BX664727.1-201ENST00000416024 466 ntBASIC2.7□□□□□ -1.98
TREX1Q9NSU2 RPL17P35-201ENST00000432217 549 ntBASIC2.7□□□□□ -1.98
TREX1Q9NSU2 COX6CP2-201ENST00000444980 225 ntBASIC2.7□□□□□ -1.98
TREX1Q9NSU2 MTND3P24-201ENST00000506306 329 ntBASIC2.7□□□□□ -1.98
TREX1Q9NSU2 MLLT10P2-201ENST00000506434 249 ntBASIC2.7□□□□□ -1.98
TREX1Q9NSU2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TREX1Q9NSU2 OR8K2P-201ENST00000524645 927 ntBASIC2.7□□□□□ -1.98
TREX1Q9NSU2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TREX1Q9NSU2 OR4P1P-201ENST00000530808 1136 ntBASIC2.7□□□□□ -1.98
TREX1Q9NSU2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.7□□□□□ -1.98
TREX1Q9NSU2 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.7□□□□□ -1.98
TREX1Q9NSU2 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.7□□□□□ -1.98
TREX1Q9NSU2 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.7□□□□□ -1.98
TREX1Q9NSU2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.7□□□□□ -1.98
TREX1Q9NSU2 NBEAP1-201ENST00000554452 979 ntBASIC2.7□□□□□ -1.98
TREX1Q9NSU2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.7□□□□□ -1.98
TREX1Q9NSU2 MTCO1P40-201ENST00000574371 625 ntBASIC2.7□□□□□ -1.98
TREX1Q9NSU2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms