Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 Z99497.1-201ENST00000421282 135 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 AC093698.1-201ENST00000423843 571 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 MTND1P29-201ENST00000448112 647 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 AC104073.1-201ENST00000451988 151 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 RN7SL93P-201ENST00000463035 293 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 AC078817.1-201ENST00000492623 435 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 NDUFB4P9-201ENST00000511646 388 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 GMPSP1-201ENST00000514075 579 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 AC016065.2-201ENST00000514530 444 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 IGLVIV-53-201ENST00000520107 367 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 HSPA8P13-201ENST00000523715 472 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 OR4R3P-201ENST00000525084 838 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 AC092470.1-201ENST00000546187 132 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 AC024560.3-201ENST00000608482 349 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 AC008443.7-201ENST00000622195 246 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 U6.101-201ENST00000637707 76 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.03□□□□□ -1.77
DDX4Q9NQI0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 RNA5SP88-201ENST00000365560 109 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 Y_RNA.560-201ENST00000384689 102 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 EIF5P1-201ENST00000400019 1231 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 MED14P1-201ENST00000430517 648 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AC098826.1-201ENST00000433943 471 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 MRPS18BP2-201ENST00000434310 759 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 SKP1P1-201ENST00000438081 489 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AC118469.1-201ENST00000442943 488 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 RPS29P31-201ENST00000446147 164 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AC009961.3-201ENST00000449832 765 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 BX276092.4-201ENST00000452056 248 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 RPS27AP8-201ENST00000452665 445 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 LTV1P1-201ENST00000510683 1237 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 MIR3915-201ENST00000578518 97 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 Z83843.1-201ENST00000604070 3685 ntBASIC4.02□□□□□ -1.77
DDX4Q9NQI0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
DDX4Q9NQI0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 RNA5SP189-201ENST00000364920 115 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 RNU6-920P-201ENST00000410926 92 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 Z99755.1-201ENST00000414048 380 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 MTND4P32-201ENST00000437189 1237 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 SNRPEP7-201ENST00000438350 220 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 RPL23AP33-201ENST00000442301 452 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 AL136126.1-201ENST00000473603 402 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 RPS3AP50-201ENST00000487064 803 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 AP001086.1-201ENST00000494882 321 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms