Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 RNU6-224P-201ENST00000384055 107 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 RNU6-76P-201ENST00000384060 104 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 DHFRP6-201ENST00000401776 268 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 RNA5SP229-201ENST00000410809 99 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 RNA5SP344-201ENST00000411081 104 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC069282.1-201ENST00000411911 526 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AL356320.2-201ENST00000417263 507 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AL645937.1-202ENST00000421799 937 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC093151.1-201ENST00000427711 313 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC090774.1-201ENST00000435925 246 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC234775.1-201ENST00000454247 670 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 RPL31P60-201ENST00000478450 367 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC025518.1-201ENST00000479856 347 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC079203.1-201ENST00000487972 404 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC104629.1-201ENST00000494226 508 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC118282.1-201ENST00000506408 765 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC069306.1-201ENST00000507006 843 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 HMGB1P28-201ENST00000507778 552 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 NPM1P41-201ENST00000512920 831 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC017037.2-201ENST00000513850 890 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC026801.2-201ENST00000515352 425 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 SNORA31.21-201ENST00000517180 77 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 LRRC6P1-201ENST00000532188 885 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 NBEAP1-201ENST00000554452 979 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 ACTR3BP3-201ENST00000565577 979 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 HMGB1P6-201ENST00000569046 646 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 BNIP3P11-201ENST00000603878 563 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AL590392.1-201ENST00000604960 446 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC112220.2-201ENST00000605513 533 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AL157817.1-201ENST00000614264 790 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 ZNF519P1-201ENST00000449011 1626 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC109315.1-201ENST00000584143 1347 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 AC138915.1-201ENST00000565427 1685 ntBASIC2.12□□□□□ -2.07
SND1-IT1Q9HBX3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 RNU5A-1-201ENST00000362698 116 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AL359837.1-201ENST00000381357 287 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 SNORD17-201ENST00000390930 237 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 SNORA40.4-201ENST00000390971 128 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 RNA5SP274-201ENST00000410484 108 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AL807761.1-201ENST00000417622 171 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 NIPA2P1-201ENST00000426223 976 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC104332.2-201ENST00000429959 156 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 ATP5JP1-201ENST00000431631 322 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC092573.2-201ENST00000434546 243 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AP000949.1-201ENST00000438328 629 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 ATP5C1P1-201ENST00000441945 895 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC009237.8-201ENST00000445492 379 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 GAPDHP27-201ENST00000447427 1020 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 HSPE1P6-201ENST00000479457 291 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 CEACAMP10-202ENST00000495431 496 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC114322.1-201ENST00000506771 926 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 RNU6-528P-201ENST00000516926 100 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 IGKV2-26-201ENST00000518305 343 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC007224.1-201ENST00000564410 144 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC034268.2-201ENST00000571784 482 ntBASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.11□□□□□ -2.07
SND1-IT1Q9HBX3 RN7SL339P-201ENST00000580597 296 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms