Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 SAP18P1-201ENST00000512058 390 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 RNU6-430P-201ENST00000517078 107 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 MTCO2P4-201ENST00000517968 247 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 CCNG2P1-201ENST00000549521 1000 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 AC022968.1-201ENST00000567372 442 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 AC137800.2-201ENST00000574375 120 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 OR4G1P-201ENST00000588632 938 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 HMGN1P30-201ENST00000589286 268 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 AC007566.2-201ENST00000603642 413 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 AC103710.1-201ENST00000610003 901 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 AC091304.9-201ENST00000612091 226 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 AC099669.2-201ENST00000616549 437 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 SEPT14P19-203ENST00000633205 211 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 Z82217.1-201ENST00000625157 8149 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.18□□□□□ -1.74
USP29Q9HBJ7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP29Q9HBJ7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AC092447.10-201ENST00000620607 1652 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 RNU6-28P-201ENST00000362378 107 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 Y_RNA.46-201ENST00000362695 102 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 U8.3-201ENST00000363321 132 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 SNORD82-201ENST00000365530 70 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 RNU1-89P-201ENST00000384592 164 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 MTATP6P27-201ENST00000416987 621 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AL117339.2-201ENST00000430475 180 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 EZH2P1-201ENST00000431167 291 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 MTND3P21-201ENST00000433774 331 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AF228730.2-201ENST00000438784 848 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AC146507.1-201ENST00000468335 354 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AP001025.2-201ENST00000490908 477 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AC012170.1-201ENST00000495139 359 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 TXNP6-201ENST00000510190 310 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AC022483.1-201ENST00000514020 567 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 RNU2-46P-201ENST00000517038 113 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AC009101.1-201ENST00000568135 242 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AC053481.3-201ENST00000577881 843 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 RN7SL600P-201ENST00000581811 299 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AC006130.2-201ENST00000586202 326 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 YWHAQP7-201ENST00000603536 658 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AL513477.2-201ENST00000607858 568 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AF250324.2-201ENST00000608299 610 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 U4.5-201ENST00000617137 123 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AC136475.10-201ENST00000620253 385 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 OR5H6-203ENST00000642105 978 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AL359893.1-201ENST00000447628 1580 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 AC095050.2-201ENST00000510748 1458 ntBASIC4.17□□□□□ -1.74
USP29Q9HBJ7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.17□□□□□ -1.74
USP29Q9HBJ7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 NUP58P1-201ENST00000502546 1738 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AL161781.1-201ENST00000354277 403 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 RNU6-1283P-201ENST00000365314 105 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 RNU6-878P-201ENST00000384578 110 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 AC127526.1-201ENST00000417526 366 ntBASIC4.16□□□□□ -1.74
USP29Q9HBJ7 C1DP2-201ENST00000418167 426 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms