Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 RPS29P9-201ENST00000440360 171 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 RPL21P89-201ENST00000444021 467 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 CEACAMP7-201ENST00000444105 496 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 RNU7-152P-201ENST00000458982 64 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 RNU7-180P-201ENST00000459240 63 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 ST13P14-201ENST00000474095 734 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AC073073.1-201ENST00000493920 463 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AC091885.1-201ENST00000506658 268 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AC104057.1-201ENST00000515547 497 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 RNA5SP43-201ENST00000516559 110 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 RNA5SP503-201ENST00000517047 117 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-1137P-201ENST00000517073 99 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AC011979.2-201ENST00000527568 352 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AC109635.4-202ENST00000531666 412 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AP000763.2-201ENST00000540641 163 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AC063950.1-201ENST00000552036 308 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 MIR4436B2-201ENST00000581415 91 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 MIR4436B1-201ENST00000583272 91 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AC010424.2-201ENST00000607594 443 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 OR52H1-202ENST00000641796 1061 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AC000123.3-201ENST00000624029 4975 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 MTND4P14-201ENST00000435799 1354 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 RPL32P3-201ENST00000359025 275 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 Y_RNA.187-201ENST00000363918 113 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 SSXP10-201ENST00000402595 565 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC074085.1-201ENST00000413598 418 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 MED13P1-201ENST00000428342 171 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AL354710.1-201ENST00000453641 246 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 MTND1P9-201ENST00000453775 944 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 RPL30P15-201ENST00000457129 321 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-1208P-201ENST00000459588 107 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 RN7SL610P-201ENST00000463845 291 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 RN7SL319P-201ENST00000480656 221 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC068305.1-201ENST00000497406 726 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 TRBVA-201ENST00000498804 316 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 RN7SKP24-201ENST00000515888 284 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 RNA5SP249-201ENST00000516127 99 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AL358913.1-201ENST00000554342 121 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 MIR4503-201ENST00000582187 83 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 MIR4424-201ENST00000585257 86 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC011477.5-201ENST00000586571 259 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC022893.3-201ENST00000607665 437 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 uc_338.34-201ENST00000617467 174 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AP000843.1-201ENST00000624880 701 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms