Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RNU4-68P-201ENST00000364314 141 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 AL161449.1-201ENST00000414531 1199 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 AC096632.1-201ENST00000427395 310 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 RPL21P40-201ENST00000428586 483 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 AC092393.1-201ENST00000439625 742 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 RPL23AP33-201ENST00000442301 452 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 AL135938.1-201ENST00000443141 297 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 AC011979.1-201ENST00000472300 483 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 AP004217.1-201ENST00000480579 346 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 MTCO3P35-201ENST00000485582 781 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 RPL5P23-201ENST00000496040 868 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 AC097462.2-201ENST00000504623 481 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 HIGD1AP13-201ENST00000509878 289 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 IGKV2D-36-201ENST00000518643 226 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 HPRT1P3-201ENST00000539521 576 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 SULT1C2P1-202ENST00000562418 459 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 AC023813.2-201ENST00000564321 469 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 RNA5SP108-201ENST00000605921 117 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 AC099778.2-201ENST00000610904 211 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 MKKS-204ENST00000639674 192 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 MTND5P27-201ENST00000428871 1720 ntBASIC3.36□□□□□ -1.87
RNF41Q9H4P4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 MTND5P19-201ENST00000424872 1794 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RNF41Q9H4P4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF41Q9H4P4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF41Q9H4P4 RNU6-525P-201ENST00000363685 104 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 SNORD116.1-201ENST00000365628 92 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 RNU6-906P-201ENST00000384700 70 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 AL451074.5-201ENST00000415894 435 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 OFD1P18Y-201ENST00000420889 959 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 OR51AB1P-201ENST00000429046 620 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 AC093156.1-201ENST00000440382 670 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 EEF1A1P39-201ENST00000440791 250 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF41Q9H4P4 AC112653.1-201ENST00000443851 386 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF41Q9H4P4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF41Q9H4P4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF41Q9H4P4 MTCO3P2-201ENST00000457365 171 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 PNPLA4P1-201ENST00000458328 305 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 AC146507.1-201ENST00000468335 354 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 SNRPGP3-201ENST00000469405 227 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 AC092451.1-201ENST00000480211 153 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 RNF138P1-201ENST00000502765 546 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 AC008837.2-201ENST00000513076 418 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 MTCO1P30-201ENST00000515244 580 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 RNU6-1261P-201ENST00000517194 104 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 AC027309.2-201ENST00000520566 192 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 AC092470.1-201ENST00000546187 132 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 MTCYBP27-201ENST00000555160 670 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.35□□□□□ -1.87
RNF41Q9H4P4 OR4G1P-201ENST00000588632 938 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF41Q9H4P4 AC007687.1-201ENST00000602704 304 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 GAS5-AS1-201ENST00000602767 694 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 AC068722.2-201ENST00000618734 544 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF41Q9H4P4 AC130650.2-201ENST00000618736 2403 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 GABPAP-201ENST00000419271 1356 ntBASIC3.35□□□□□ -1.87
RNF41Q9H4P4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF41Q9H4P4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF41Q9H4P4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 RNU6-356P-201ENST00000384140 107 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 SSXP10-201ENST00000402595 565 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 NDUFB4P4-201ENST00000404822 243 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AL592310.1-201ENST00000414330 671 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 SSR1P2-201ENST00000415208 787 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 MTCO3P1-205ENST00000422088 832 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 COTL1P1-201ENST00000422309 375 ntBASIC3.34□□□□□ -1.87
RNF41Q9H4P4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.34□□□□□ -1.87
RNF41Q9H4P4 AC005517.2-201ENST00000424673 553 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms