Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 SNORA31.8-201ENST00000516327 108 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 UBE2NP1-201ENST00000545592 458 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC008011.1-201ENST00000545989 227 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 ELOCP32-201ENST00000548625 324 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 OR4K8P-201ENST00000578842 1048 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 MIR5047-201ENST00000579212 100 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 MIR4999-201ENST00000585029 91 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC008739.3-201ENST00000603262 127 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 RNVU1-4-201ENST00000612985 164 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AL590099.1-201ENST00000615276 138 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AP002791.1-201ENST00000623291 381 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AL356596.1-201ENST00000624230 379 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AL136164.4-201ENST00000625013 2135 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC009093.8-201ENST00000641769 292 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC104454.1-201ENST00000421341 1401 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AL161781.1-201ENST00000354277 403 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 RNA5SP119-201ENST00000362715 117 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 RNU6-1155P-201ENST00000363554 107 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 RNA5SP42-201ENST00000364278 115 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 Y_RNA.234-201ENST00000364409 97 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 RNU6-1200P-201ENST00000384162 107 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 MTND4P13-201ENST00000402078 1023 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AC245054.1-201ENST00000420944 258 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 CYCSP4-201ENST00000429682 331 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AL008629.1-201ENST00000438615 184 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 ARPC3P2-201ENST00000457786 533 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AC104563.1-201ENST00000476147 376 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 MTCYBP35-201ENST00000503630 1137 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 CCNG2P1-201ENST00000549521 1000 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AL391156.1-201ENST00000554965 554 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 RNU6-88P-201ENST00000606801 100 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 TUG1_1.1-201ENST00000610654 145 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AL110115.1-201ENST00000614396 364 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AC008121.2-201ENST00000614647 523 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AC017037.3-201ENST00000625016 472 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AC119674.1-207ENST00000641355 633 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 AP000526.1-201ENST00000603308 1388 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 RIOK3P1-201ENST00000418778 1528 ntBASIC3.32□□□□□ -1.88
UBQLN3Q9H347 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.32□□□□□ -1.88
UBQLN3Q9H347 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC011477.1-204ENST00000623416 1325 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 RNU6-462P-201ENST00000362659 105 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 RN7SKP285-201ENST00000410137 318 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC005005.2-201ENST00000420779 380 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC069157.1-201ENST00000421749 137 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AL035407.1-201ENST00000429211 571 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 YWHAZP7-201ENST00000436906 631 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AL358232.1-201ENST00000448030 501 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC073387.1-201ENST00000453261 709 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AL049830.2-201ENST00000480072 201 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 HMGB1P36-201ENST00000487709 576 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC118282.1-201ENST00000506408 765 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC026784.1-201ENST00000507986 352 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms