Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 YPEL5P2-201ENST00000605553 359 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 AC096577.2-201ENST00000611455 153 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 AC126544.2-201ENST00000625174 749 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 OR5BR1P-201ENST00000524992 1330 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 API5P2-201ENST00000397055 1498 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 CD24P4-201ENST00000382840 243 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC110754.1-201ENST00000399740 601 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 RPL7P25-201ENST00000404151 721 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 RNA5SP293-201ENST00000410527 113 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC007899.1-201ENST00000412776 775 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 NDUFB4P5-201ENST00000415445 361 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 RPL27AP8-201ENST00000424277 446 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 RPS12P18-201ENST00000442381 270 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC125238.1-201ENST00000448842 249 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 USP9YP34-201ENST00000453983 808 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 BX510359.1-201ENST00000456973 237 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC108860.1-201ENST00000484521 383 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC126365.2-201ENST00000580630 379 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC097504.2-201ENST00000608088 454 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC091046.2-201ENST00000620775 665 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC022509.4-201ENST00000621404 572 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AP003122.6-201ENST00000623831 495 ntBASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
POLR1EQ9GZS1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 RNU6-707P-201ENST00000364647 95 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AC096533.1-201ENST00000411645 353 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 SETP8-201ENST00000435341 628 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AC016696.1-201ENST00000446949 318 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 OFD1P3Y-201ENST00000453312 783 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AL031183.1-201ENST00000457667 207 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 RPS3AP43-201ENST00000479743 781 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AC068724.1-201ENST00000487100 792 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 CAB39P1-201ENST00000502277 460 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 KCTD9P5-201ENST00000504141 1170 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 SNORA70.16-201ENST00000516390 95 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 RNU6-1261P-201ENST00000517194 104 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 SNORA31.26-201ENST00000517250 137 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AC087897.1-201ENST00000550134 156 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 MIR4506-201ENST00000584693 77 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 CCDC58P3-201ENST00000590792 430 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AC013444.2-201ENST00000603317 787 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AC012468.1-201ENST00000604888 430 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AP002802.2-201ENST00000605877 235 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 DUXAP10-204ENST00000612052 616 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 AC026422.1-201ENST00000623961 452 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 CRYM-AS1-204ENST00000637983 556 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 TAB3P1-202ENST00000452645 1634 ntBASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
POLR1EQ9GZS1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 ANKRD36P1-201ENST00000344424 659 ntBASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.13□□□□□ -1.91
POLR1EQ9GZS1 RNU6-1027P-201ENST00000383998 107 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms