Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 RPL21P5-201ENST00000554662 472 ntBASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 AL109766.1-201ENST00000555080 552 ntBASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 HMGN1P30-201ENST00000589286 268 ntBASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 AL022099.1-201ENST00000604551 712 ntBASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 AL354984.3-201ENST00000604803 325 ntBASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 AL590282.1-201ENST00000610379 1136 ntBASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 AC012531.5-201ENST00000611375 151 ntBASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 AC100793.4-201ENST00000613683 429 ntBASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 AL391261.4-201ENST00000616012 481 ntBASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 MIR6130-201ENST00000619419 109 ntBASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 AC009268.2-201ENST00000621925 457 ntBASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 AL159972.1-201ENST00000625150 448 ntBASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 ZNF962P-201ENST00000443465 3140 ntBASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCGF1Q9BSM1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AL138713.1-201ENST00000624026 2130 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 SNORA31-201ENST00000362607 130 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 RNU6-623P-201ENST00000363143 105 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 RNA5SP189-201ENST00000364920 115 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 RNU6-637P-201ENST00000384050 107 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 RNU6-1119P-201ENST00000384349 108 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 Y_RNA.559-201ENST00000384686 107 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 SNORD116-4-201ENST00000384733 96 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 FCF1P10-201ENST00000407590 479 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 RPS3AP24-201ENST00000407896 734 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 RPS3AP3-201ENST00000411933 242 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 MTND1P21-201ENST00000412991 285 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC009237.5-201ENST00000414271 501 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 MTCO1P39-201ENST00000426148 480 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC004975.1-201ENST00000428733 208 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 RPL17P49-201ENST00000443728 411 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC114755.5-201ENST00000447760 831 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 CFTRP1-201ENST00000456646 183 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 RPL7P15-201ENST00000461190 712 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC079804.1-201ENST00000461922 436 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 RPL23AP41-201ENST00000484754 458 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 LARP1BP2-201ENST00000486594 519 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 RPS3AP50-201ENST00000487064 803 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 BNIP3P41-201ENST00000503774 571 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC008958.1-201ENST00000511047 682 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC023141.12-201ENST00000512399 199 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 Y_RNA.655-201ENST00000515919 96 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 RNA5SP49-201ENST00000516450 115 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 RNA5SP519-201ENST00000516480 119 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 RNU6-1073P-201ENST00000517182 106 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AP003181.2-201ENST00000528941 181 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 SNORD84-203ENST00000584275 78 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AL020997.2-201ENST00000602607 184 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC068790.3-201ENST00000602988 553 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC020910.2-201ENST00000603635 610 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC008250.2-201ENST00000615261 205 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AL450472.3-201ENST00000615578 367 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC108479.2-201ENST00000617314 601 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 AC010149.2-201ENST00000637608 315 ntBASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCGF1Q9BSM1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms