Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.22□□□□□ -1.73
VRK1Q99986 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.22□□□□□ -1.73
VRK1Q99986 SNORD97-201ENST00000459187 142 ntBASIC4.22□□□□□ -1.73
VRK1Q99986 AC007537.2-201ENST00000472093 511 ntBASIC4.22□□□□□ -1.73
VRK1Q99986 AC126389.1-201ENST00000477436 290 ntBASIC4.22□□□□□ -1.73
VRK1Q99986 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.22□□□□□ -1.73
VRK1Q99986 DEFB109F-201ENST00000491870 277 ntBASIC4.22□□□□□ -1.73
VRK1Q99986 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.22□□□□□ -1.73
VRK1Q99986 MRPS33P2-201ENST00000507850 322 ntBASIC4.22□□□□□ -1.73
VRK1Q99986 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.22□□□□□ -1.73
VRK1Q99986 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.22□□□□□ -1.73
VRK1Q99986 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.22□□□□□ -1.73
VRK1Q99986 HIGD1AP5-201ENST00000529959 259 ntBASIC4.22□□□□□ -1.73
VRK1Q99986 AC034105.3-201ENST00000565294 442 ntBASIC4.22□□□□□ -1.73
VRK1Q99986 HMGN2P28-201ENST00000606102 262 ntBASIC4.22□□□□□ -1.73
VRK1Q99986 AC092794.2-201ENST00000620933 563 ntBASIC4.22□□□□□ -1.73
VRK1Q99986 AC006065.6-201ENST00000625201 545 ntBASIC4.22□□□□□ -1.73
VRK1Q99986 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.22□□□□□ -1.73
VRK1Q99986 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VRK1Q99986 AL672167.1-203ENST00000641299 2975 ntBASIC4.22□□□□□ -1.73
VRK1Q99986 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.22□□□□□ -1.73
VRK1Q99986 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.22□□□□□ -1.73
VRK1Q99986 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.22□□□□□ -1.73
VRK1Q99986 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
VRK1Q99986 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.22□□□□□ -1.73
VRK1Q99986 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.21□□□□□ -1.73
VRK1Q99986 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.21□□□□□ -1.74
VRK1Q99986 AC068254.2-201ENST00000623938 3577 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VRK1Q99986 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
VRK1Q99986 Y_RNA.367-201ENST00000365544 101 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 RNU4-48P-201ENST00000365559 182 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 RNU5E-6P-201ENST00000365574 115 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 SNORD96B-201ENST00000386148 79 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 AL136372.1-201ENST00000403060 228 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 RNU2-9P-201ENST00000410194 145 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 RN7SKP159-201ENST00000410657 292 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 RNA5SP146-201ENST00000410743 123 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 VDAC1P9-201ENST00000412766 841 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK1Q99986 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.21□□□□□ -1.74
VRK1Q99986 SNRPFP1-201ENST00000414761 252 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK1Q99986 UBE2FP1-201ENST00000416536 447 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK1Q99986 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.21□□□□□ -1.74
VRK1Q99986 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK1Q99986 GTF2IP20-201ENST00000431663 360 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 AC090774.1-201ENST00000435925 246 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 BNIP3P2-201ENST00000441221 577 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK1Q99986 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK1Q99986 SNRPGP6-201ENST00000451124 220 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK1Q99986 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.21□□□□□ -1.74
VRK1Q99986 SCARNA10-201ENST00000459255 330 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 RN7SL738P-201ENST00000470264 297 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 AC006463.2-201ENST00000473326 348 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.21□□□□□ -1.74
VRK1Q99986 AC123904.3-201ENST00000547218 814 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 ARL2BPP2-201ENST00000550907 489 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.21□□□□□ -1.74
VRK1Q99986 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK1Q99986 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.21□□□□□ -1.74
VRK1Q99986 AC060780.3-201ENST00000589464 80 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 XIAPP1-201ENST00000603162 600 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 AC020910.3-201ENST00000603701 874 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 AC010680.3-201ENST00000604215 520 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.21□□□□□ -1.74
VRK1Q99986 AL357078.3-201ENST00000607528 618 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VRK1Q99986 AL450472.3-201ENST00000615578 367 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 YWHAEP7-203ENST00000622054 312 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 AP003122.6-201ENST00000623831 495 ntBASIC4.21□□□□□ -1.74
VRK1Q99986 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
VRK1Q99986 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.21□□□□□ -1.74
VRK1Q99986 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VRK1Q99986 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
VRK1Q99986 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
VRK1Q99986 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.21□□□□□ -1.74
VRK1Q99986 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VRK1Q99986 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VRK1Q99986 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VRK1Q99986 CASC19-280ENST00000642102 1351 ntBASIC4.2□□□□□ -1.74
VRK1Q99986 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VRK1Q99986 AC073343.1-201ENST00000328239 651 ntBASIC4.2□□□□□ -1.74
VRK1Q99986 RNA5SP191-201ENST00000362585 102 ntBASIC4.2□□□□□ -1.74
VRK1Q99986 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VRK1Q99986 AL133412.1-201ENST00000380194 2992 ntBASIC4.2□□□□□ -1.74
VRK1Q99986 SNORA69-201ENST00000383895 132 ntBASIC4.2□□□□□ -1.74
VRK1Q99986 SNORD3H-201ENST00000384486 214 ntBASIC4.2□□□□□ -1.74
VRK1Q99986 MIR454-201ENST00000390180 115 ntBASIC4.2□□□□□ -1.74
VRK1Q99986 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VRK1Q99986 LAP3P1-201ENST00000403648 294 ntBASIC4.2□□□□□ -1.74
VRK1Q99986 RPL21P24-201ENST00000413752 448 ntBASIC4.2□□□□□ -1.74
VRK1Q99986 AC009237.10-201ENST00000414112 510 ntBASIC4.2□□□□□ -1.74
VRK1Q99986 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.2□□□□□ -1.74
VRK1Q99986 RPL26P29-201ENST00000415623 438 ntBASIC4.2□□□□□ -1.74
VRK1Q99986 RPL30P16-201ENST00000419341 429 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms