Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 PWAR6-201ENST00000552334 4618 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
COL12A1Q99715 AC103988.1-201ENST00000566382 2177 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 MTCO1P4-201ENST00000520516 1409 ntBASIC1.65□□□□□ -2.14
COL12A1Q99715 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.65□□□□□ -2.14
COL12A1Q99715 NDUFB4P5-201ENST00000415445 361 ntBASIC1.65□□□□□ -2.14
COL12A1Q99715 IPMKP1-201ENST00000425988 855 ntBASIC1.65□□□□□ -2.14
COL12A1Q99715 AC027124.2-201ENST00000428249 105 ntBASIC1.65□□□□□ -2.14
COL12A1Q99715 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.65□□□□□ -2.14
COL12A1Q99715 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.65□□□□□ -2.14
COL12A1Q99715 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.65□□□□□ -2.14
COL12A1Q99715 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.65□□□□□ -2.14
COL12A1Q99715 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.65□□□□□ -2.14
COL12A1Q99715 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.65□□□□□ -2.14
COL12A1Q99715 LRRC77P-213ENST00000637727 880 ntBASIC1.65□□□□□ -2.14
COL12A1Q99715 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
COL12A1Q99715 AC093010.3-201ENST00000570269 15214 ntBASIC1.65□□□□□ -2.14
COL12A1Q99715 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.65□□□□□ -2.15
COL12A1Q99715 AC245100.2-201ENST00000454544 1679 ntBASIC1.65□□□□□ -2.15
COL12A1Q99715 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
COL12A1Q99715 RNY1P4-201ENST00000384595 115 ntBASIC1.65□□□□□ -2.15
COL12A1Q99715 TPMTP3-201ENST00000411928 735 ntBASIC1.65□□□□□ -2.15
COL12A1Q99715 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.65□□□□□ -2.15
COL12A1Q99715 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.65□□□□□ -2.15
COL12A1Q99715 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.65□□□□□ -2.15
COL12A1Q99715 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.65□□□□□ -2.15
COL12A1Q99715 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
COL12A1Q99715 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.65□□□□□ -2.15
COL12A1Q99715 RNU6-37P-201ENST00000362692 107 ntBASIC1.65□□□□□ -2.15
COL12A1Q99715 RNU6-11P-201ENST00000364234 107 ntBASIC1.65□□□□□ -2.15
COL12A1Q99715 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.65□□□□□ -2.15
COL12A1Q99715 CBWD4P-201ENST00000445695 655 ntBASIC1.65□□□□□ -2.15
COL12A1Q99715 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.65□□□□□ -2.15
COL12A1Q99715 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.65□□□□□ -2.15
COL12A1Q99715 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.65□□□□□ -2.15
COL12A1Q99715 OOSP1P2-201ENST00000579644 351 ntBASIC1.65□□□□□ -2.15
COL12A1Q99715 OR10AB1P-201ENST00000609613 938 ntBASIC1.65□□□□□ -2.15
COL12A1Q99715 AC069234.5-201ENST00000611056 416 ntBASIC1.65□□□□□ -2.15
COL12A1Q99715 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.64□□□□□ -2.15
COL12A1Q99715 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.64□□□□□ -2.15
COL12A1Q99715 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
COL12A1Q99715 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.64□□□□□ -2.15
COL12A1Q99715 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL12A1Q99715 SDR42E1P3-201ENST00000438345 502 ntBASIC1.64□□□□□ -2.15
COL12A1Q99715 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.64□□□□□ -2.15
COL12A1Q99715 CBX3P4-201ENST00000538909 354 ntBASIC1.64□□□□□ -2.15
COL12A1Q99715 MIR5089-201ENST00000580047 84 ntBASIC1.64□□□□□ -2.15
COL12A1Q99715 AP005137.2-201ENST00000609238 400 ntBASIC1.64□□□□□ -2.15
COL12A1Q99715 AC244517.12-201ENST00000623581 663 ntBASIC1.64□□□□□ -2.15
COL12A1Q99715 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
COL12A1Q99715 MIR1294-201ENST00000408503 142 ntBASIC1.64□□□□□ -2.15
COL12A1Q99715 AIMP1P1-201ENST00000418670 937 ntBASIC1.64□□□□□ -2.15
COL12A1Q99715 MTCYBP7-201ENST00000419540 1134 ntBASIC1.64□□□□□ -2.15
COL12A1Q99715 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.64□□□□□ -2.15
COL12A1Q99715 AC067805.1-201ENST00000559344 470 ntBASIC1.64□□□□□ -2.15
COL12A1Q99715 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.64□□□□□ -2.15
COL12A1Q99715 AC136443.5-201ENST00000603741 370 ntBASIC1.64□□□□□ -2.15
COL12A1Q99715 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.64□□□□□ -2.15
COL12A1Q99715 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.64□□□□□ -2.15
COL12A1Q99715 AL133216.2-202ENST00000634512 349 ntBASIC1.64□□□□□ -2.15
COL12A1Q99715 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.64□□□□□ -2.15
COL12A1Q99715 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL12A1Q99715 RNU6-249P-201ENST00000363016 102 ntBASIC1.63□□□□□ -2.15
COL12A1Q99715 RNU1-51P-201ENST00000365345 176 ntBASIC1.63□□□□□ -2.15
COL12A1Q99715 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.63□□□□□ -2.15
COL12A1Q99715 AC002524.1-201ENST00000411687 547 ntBASIC1.63□□□□□ -2.15
COL12A1Q99715 HMGB1P11-201ENST00000413899 637 ntBASIC1.63□□□□□ -2.15
COL12A1Q99715 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.63□□□□□ -2.15
COL12A1Q99715 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.63□□□□□ -2.15
COL12A1Q99715 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.63□□□□□ -2.15
COL12A1Q99715 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.63□□□□□ -2.15
COL12A1Q99715 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.63□□□□□ -2.15
COL12A1Q99715 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.63□□□□□ -2.15
COL12A1Q99715 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.63□□□□□ -2.15
COL12A1Q99715 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.63□□□□□ -2.15
COL12A1Q99715 MIR7973-1-201ENST00000614683 76 ntBASIC1.63□□□□□ -2.15
COL12A1Q99715 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.63□□□□□ -2.15
COL12A1Q99715 RNU1-138P-201ENST00000384093 164 ntBASIC1.63□□□□□ -2.15
COL12A1Q99715 RN7SKP123-201ENST00000410732 291 ntBASIC1.63□□□□□ -2.15
COL12A1Q99715 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.63□□□□□ -2.15
COL12A1Q99715 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.63□□□□□ -2.15
COL12A1Q99715 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.63□□□□□ -2.15
COL12A1Q99715 RN7SKP49-201ENST00000516675 260 ntBASIC1.63□□□□□ -2.15
COL12A1Q99715 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.63□□□□□ -2.15
COL12A1Q99715 AC016957.1-201ENST00000534895 309 ntBASIC1.63□□□□□ -2.15
COL12A1Q99715 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.63□□□□□ -2.15
COL12A1Q99715 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL12A1Q99715 AL160394.1-201ENST00000624765 724 ntBASIC1.63□□□□□ -2.15
COL12A1Q99715 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
COL12A1Q99715 MAPK10-266ENST00000641066 6555 ntBASIC1.63□□□□□ -2.15
COL12A1Q99715 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL12A1Q99715 SNORA31-201ENST00000362607 130 ntBASIC1.63□□□□□ -2.15
COL12A1Q99715 Y_RNA.68-201ENST00000362881 102 ntBASIC1.63□□□□□ -2.15
COL12A1Q99715 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL12A1Q99715 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.63□□□□□ -2.15
COL12A1Q99715 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.63□□□□□ -2.15
COL12A1Q99715 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.63□□□□□ -2.15
COL12A1Q99715 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL12A1Q99715 SEPT7P7-201ENST00000420492 1301 ntBASIC1.62□□□□□ -2.15
COL12A1Q99715 SNORA68.2-201ENST00000391263 128 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms