Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC008526.1-201ENST00000509149 338 ntBASIC1.67□□□□□ -2.14
SPENQ96T58 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.67□□□□□ -2.14
SPENQ96T58 AC067805.1-201ENST00000559344 470 ntBASIC1.67□□□□□ -2.14
SPENQ96T58 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.67□□□□□ -2.14
SPENQ96T58 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.67□□□□□ -2.14
SPENQ96T58 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.67□□□□□ -2.14
SPENQ96T58 ZNF355P-201ENST00000427301 3216 ntBASIC1.67□□□□□ -2.14
SPENQ96T58 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
SPENQ96T58 RNU6-53P-201ENST00000365367 106 ntBASIC1.67□□□□□ -2.14
SPENQ96T58 SNORA68.2-201ENST00000391263 128 ntBASIC1.67□□□□□ -2.14
SPENQ96T58 YWHAZP7-201ENST00000436906 631 ntBASIC1.67□□□□□ -2.14
SPENQ96T58 RNU1-123P-201ENST00000458950 160 ntBASIC1.67□□□□□ -2.14
SPENQ96T58 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
SPENQ96T58 AC022634.1-201ENST00000520765 532 ntBASIC1.67□□□□□ -2.14
SPENQ96T58 OR10D4P-201ENST00000525892 951 ntBASIC1.67□□□□□ -2.14
SPENQ96T58 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.67□□□□□ -2.14
SPENQ96T58 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.67□□□□□ -2.14
SPENQ96T58 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.67□□□□□ -2.14
SPENQ96T58 AC009314.1-201ENST00000603871 304 ntBASIC1.67□□□□□ -2.14
SPENQ96T58 RPL23AP61-201ENST00000623642 466 ntBASIC1.67□□□□□ -2.14
SPENQ96T58 AC095050.2-201ENST00000510748 1458 ntBASIC1.66□□□□□ -2.14
SPENQ96T58 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.66□□□□□ -2.14
SPENQ96T58 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SPENQ96T58 AC093775.1-201ENST00000624154 1868 ntBASIC1.66□□□□□ -2.14
SPENQ96T58 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SPENQ96T58 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SPENQ96T58 Y_RNA.30-201ENST00000362572 97 ntBASIC1.66□□□□□ -2.14
SPENQ96T58 SNORA51.4-201ENST00000364993 124 ntBASIC1.66□□□□□ -2.14
SPENQ96T58 HMGB1P27-201ENST00000431429 603 ntBASIC1.66□□□□□ -2.14
SPENQ96T58 USP9YP15-201ENST00000442391 422 ntBASIC1.66□□□□□ -2.14
SPENQ96T58 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.66□□□□□ -2.14
SPENQ96T58 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.66□□□□□ -2.14
SPENQ96T58 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SPENQ96T58 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
SPENQ96T58 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
SPENQ96T58 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SPENQ96T58 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.66□□□□□ -2.14
SPENQ96T58 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.66□□□□□ -2.14
SPENQ96T58 AL078603.1-201ENST00000603824 313 ntBASIC1.66□□□□□ -2.14
SPENQ96T58 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SPENQ96T58 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
SPENQ96T58 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SPENQ96T58 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
SPENQ96T58 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.65□□□□□ -2.14
SPENQ96T58 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
SPENQ96T58 MTCO3P31-201ENST00000405526 789 ntBASIC1.65□□□□□ -2.14
SPENQ96T58 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.65□□□□□ -2.14
SPENQ96T58 AC012119.1-201ENST00000603184 222 ntBASIC1.65□□□□□ -2.14
SPENQ96T58 AL008729.2-201ENST00000606393 473 ntBASIC1.65□□□□□ -2.14
SPENQ96T58 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC1.65□□□□□ -2.15
SPENQ96T58 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.65□□□□□ -2.15
SPENQ96T58 HMGB1P12-201ENST00000438594 598 ntBASIC1.65□□□□□ -2.15
SPENQ96T58 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.65□□□□□ -2.15
SPENQ96T58 AL451049.1-201ENST00000608672 497 ntBASIC1.65□□□□□ -2.15
SPENQ96T58 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SPENQ96T58 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SPENQ96T58 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.65□□□□□ -2.15
SPENQ96T58 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.65□□□□□ -2.15
SPENQ96T58 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.65□□□□□ -2.15
SPENQ96T58 AC027124.2-201ENST00000428249 105 ntBASIC1.65□□□□□ -2.15
SPENQ96T58 BX322784.1-201ENST00000455793 1077 ntBASIC1.65□□□□□ -2.15
SPENQ96T58 RPS29P29-201ENST00000456396 171 ntBASIC1.65□□□□□ -2.15
SPENQ96T58 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.65□□□□□ -2.15
SPENQ96T58 AC022336.2-201ENST00000568966 2538 ntBASIC1.65□□□□□ -2.15
SPENQ96T58 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.15
SPENQ96T58 SNORA67.5-201ENST00000391036 107 ntBASIC1.64□□□□□ -2.15
SPENQ96T58 SSXP1-201ENST00000453640 473 ntBASIC1.64□□□□□ -2.15
SPENQ96T58 SNRPFP4-201ENST00000456366 242 ntBASIC1.64□□□□□ -2.15
SPENQ96T58 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SPENQ96T58 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.64□□□□□ -2.15
SPENQ96T58 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SPENQ96T58 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.64□□□□□ -2.15
SPENQ96T58 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
SPENQ96T58 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SPENQ96T58 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SPENQ96T58 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.64□□□□□ -2.15
SPENQ96T58 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.64□□□□□ -2.15
SPENQ96T58 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.64□□□□□ -2.15
SPENQ96T58 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.64□□□□□ -2.15
SPENQ96T58 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.64□□□□□ -2.15
SPENQ96T58 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
SPENQ96T58 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SPENQ96T58 Y_RNA.36-201ENST00000362602 112 ntBASIC1.64□□□□□ -2.15
SPENQ96T58 RNA5SP338-201ENST00000410495 85 ntBASIC1.64□□□□□ -2.15
SPENQ96T58 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.64□□□□□ -2.15
SPENQ96T58 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.64□□□□□ -2.15
SPENQ96T58 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.64□□□□□ -2.15
SPENQ96T58 MTCO3P13-201ENST00000577757 781 ntBASIC1.64□□□□□ -2.15
SPENQ96T58 OOSP1P2-201ENST00000579644 351 ntBASIC1.64□□□□□ -2.15
SPENQ96T58 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.64□□□□□ -2.15
SPENQ96T58 AC019159.1-201ENST00000605094 187 ntBASIC1.64□□□□□ -2.15
SPENQ96T58 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.64□□□□□ -2.15
SPENQ96T58 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.64□□□□□ -2.15
SPENQ96T58 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC1.63□□□□□ -2.15
SPENQ96T58 TOMM22P1-201ENST00000418578 312 ntBASIC1.63□□□□□ -2.15
SPENQ96T58 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.63□□□□□ -2.15
SPENQ96T58 SAR1AP4-201ENST00000429225 591 ntBASIC1.63□□□□□ -2.15
SPENQ96T58 AC244505.4-201ENST00000434905 287 ntBASIC1.63□□□□□ -2.15
SPENQ96T58 AC092473.1-201ENST00000441098 221 ntBASIC1.63□□□□□ -2.15
SPENQ96T58 SSXP5-201ENST00000443473 287 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms