Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AL049781.1-201ENST00000623195 3585 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 Y_RNA.248-201ENST00000364501 109 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 MIR218-2-201ENST00000385006 110 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 Y_RNA.598-201ENST00000410480 95 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 RNA5SP104-201ENST00000410989 118 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 RNU6-603P-201ENST00000411403 107 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 MTND5P14-201ENST00000441481 1267 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 PAXBP1P1-201ENST00000449315 447 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 USP9YP12-201ENST00000450481 570 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AC017015.1-201ENST00000477387 286 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 RNU6-506P-201ENST00000516553 94 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 RN7SKP209-201ENST00000516888 304 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 MYL12AP1-201ENST00000518490 515 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 OR5B10P-201ENST00000532869 642 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AGGF1P8-201ENST00000562979 1000 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AC018552.3-201ENST00000567416 561 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 MAGOH2P-202ENST00000584384 429 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AC084757.4-201ENST00000616350 526 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 OR5H6-203ENST00000642105 978 ntBASIC4.3□□□□□ -1.72
CCDC17Q96LX7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC17Q96LX7 AC068254.2-201ENST00000623938 3577 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 Z73965.1-201ENST00000623412 2297 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 DCAF13P1-201ENST00000495256 1330 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 OR4G2P-201ENST00000328113 903 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 MIR183-201ENST00000384958 110 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 EIF5P1-201ENST00000400019 1231 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 HMGB1P17-201ENST00000403495 628 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AC023347.2-201ENST00000433994 462 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AL596276.1-201ENST00000434465 418 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 CYCSP43-201ENST00000438233 310 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 PGBD4P3-201ENST00000440731 581 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AL353572.1-201ENST00000442490 417 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AC010655.1-201ENST00000449336 292 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AC099563.1-201ENST00000456086 418 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AC004924.1-201ENST00000480160 781 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 RN7SL293P-201ENST00000481765 281 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 RPL9P6-201ENST00000492764 598 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AC105252.1-201ENST00000503089 286 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 NDUFB4P2-201ENST00000509515 391 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 RN7SKP13-201ENST00000515933 244 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 RN7SKP244-201ENST00000516513 307 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AC008011.1-201ENST00000545989 227 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 HSPE1P3-201ENST00000559254 309 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AL606834.2-201ENST00000602954 668 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AC112187.2-201ENST00000604345 283 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 MIR7851-201ENST00000610611 160 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms