Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 HMGN2P47-201ENST00000559378 272 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AC011447.4-201ENST00000587562 111 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AC020910.3-201ENST00000603701 874 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 MIR7641-1-201ENST00000627518 61 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AC068870.1-201ENST00000563737 2455 ntBASIC6.26□□□□□ -1.41
TRIM47Q96LD4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM47Q96LD4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AL138820.1-201ENST00000617901 5305 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AC018628.1-201ENST00000624147 3819 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 Y_RNA.8-201ENST00000362353 102 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 Y_RNA.84-201ENST00000363011 104 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 Y_RNA.199-201ENST00000364014 102 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 OR52E6-202ENST00000379946 954 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 RNU6-306P-201ENST00000384617 107 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 MIR192-201ENST00000384915 110 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AL009179.1-201ENST00000406085 265 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AC093156.1-201ENST00000440382 670 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 NUTF2P3-201ENST00000448540 384 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 snoU13.20-201ENST00000459180 104 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AC091021.1-201ENST00000468051 388 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 RPL23AP41-201ENST00000484754 458 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 SNORA31.6-201ENST00000516241 130 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 SCARNA16.4-201ENST00000516956 187 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AC068790.3-201ENST00000602988 553 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 OR4F13P-202ENST00000560066 2054 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 ABCC13-202ENST00000463099 3842 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 INTS6P1-201ENST00000504674 2530 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AC025125.1-201ENST00000624743 1922 ntBASIC6.25□□□□□ -1.41
TRIM47Q96LD4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM47Q96LD4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 CASC19-284ENST00000642142 1868 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 RNU6-858P-201ENST00000362436 107 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 Y_RNA.43-201ENST00000362670 111 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 RN7SKP145-201ENST00000363291 303 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 RNU4-50P-201ENST00000364361 141 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 RNU4-42P-201ENST00000364738 142 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 SNORA70.6-201ENST00000383934 134 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 SNORA51.11-201ENST00000384442 131 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 MED13P1-201ENST00000428342 171 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 AC091286.1-201ENST00000431233 461 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 AL359265.2-201ENST00000434367 631 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 GSTM5P1-201ENST00000434751 660 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 LINC02210-201ENST00000444561 288 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 AC009127.1-201ENST00000467090 155 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 RN7SL459P-201ENST00000481078 302 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 AC026979.1-201ENST00000492525 396 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 RPS27P26-201ENST00000494583 239 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 PMS2P3-207ENST00000529061 717 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 AC091516.1-201ENST00000549191 703 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 HSPE1P3-201ENST00000559254 309 ntBASIC6.24□□□□□ -1.41
TRIM47Q96LD4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM47Q96LD4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms