Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 CR392039.5-201ENST00000623201 510 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 AL161912.2-201ENST00000565707 3007 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 SNORA70.2-201ENST00000364506 135 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 RNU6-1151P-201ENST00000384684 107 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 MIR1290-201ENST00000408735 78 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 AC069157.1-201ENST00000421749 137 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 AC092170.1-201ENST00000440211 356 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 AL589880.1-201ENST00000448271 287 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 MTND4LP3-201ENST00000468320 276 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 AC108734.3-201ENST00000481241 1165 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 RPS27P23-201ENST00000487608 251 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 AC090096.1-201ENST00000489168 390 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 RN7SKP18-201ENST00000516005 275 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 BNIP3P4-201ENST00000604946 565 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 AC012443.1-201ENST00000605605 231 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 AC021851.1-201ENST00000608537 1082 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 AC245100.7-201ENST00000609678 442 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 AC009039.2-201ENST00000624524 529 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 AC132825.7-201ENST00000638744 335 ntBASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKNOX2Q96KN3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AC008173.1-201ENST00000418901 264 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 BX842559.1-201ENST00000419615 532 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AL121882.1-201ENST00000422893 417 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 RSL24D1P6-201ENST00000426934 401 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 ARF4P4-201ENST00000439608 520 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 RAB11AP1-201ENST00000442978 646 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AL358232.1-201ENST00000448030 501 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 RPS20P24-201ENST00000457473 361 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 RNU6-420P-201ENST00000458780 107 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 RPS17P11-201ENST00000474297 293 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AC118942.1-201ENST00000529674 1035 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AP000916.1-201ENST00000533869 835 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AL162713.1-201ENST00000604480 262 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AC005972.3-201ENST00000606304 481 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AC005332.10-201ENST00000612725 619 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AL445493.3-201ENST00000619568 477 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AL353748.2-201ENST00000622148 471 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 MTCO1P6-201ENST00000481192 1384 ntBASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PKNOX2Q96KN3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 AL596028.1-201ENST00000326971 197 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 RNU6-920P-201ENST00000410926 92 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 AC091286.1-201ENST00000431233 461 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 AL512661.1-201ENST00000434586 1253 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 RPL7P15-201ENST00000461190 712 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 RPL7P38-201ENST00000488396 739 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 EIF4EP3-201ENST00000498782 656 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 RNU6-202P-201ENST00000515998 96 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 OR8K2P-201ENST00000524645 927 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 AL021368.1-201ENST00000607490 540 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 AC112503.2-201ENST00000609005 552 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 AC097460.3-201ENST00000623099 442 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 AC012640.5-201ENST00000623897 319 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 AC091948.2-201ENST00000636510 279 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 AP003399.1-201ENST00000637534 361 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 MFSD8-245ENST00000641743 948 ntBASIC3.2□□□□□ -1.9
PKNOX2Q96KN3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 SNORA51.11-201ENST00000384442 131 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 MIR525-201ENST00000384978 85 ntBASIC3.19□□□□□ -1.9
PKNOX2Q96KN3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms