Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 KATNBL1P3-201ENST00000443475 909 ntBASIC1.7□□□□□ -2.14
SPG11Q96JI7 AL445669.2-201ENST00000454425 421 ntBASIC1.7□□□□□ -2.14
SPG11Q96JI7 AC068305.1-201ENST00000497406 726 ntBASIC1.7□□□□□ -2.14
SPG11Q96JI7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.7□□□□□ -2.14
SPG11Q96JI7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.7□□□□□ -2.14
SPG11Q96JI7 AL137100.2-201ENST00000555786 315 ntBASIC1.7□□□□□ -2.14
SPG11Q96JI7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.7□□□□□ -2.14
SPG11Q96JI7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.7□□□□□ -2.14
SPG11Q96JI7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
SPG11Q96JI7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
SPG11Q96JI7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.7□□□□□ -2.14
SPG11Q96JI7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.7□□□□□ -2.14
SPG11Q96JI7 AC023043.3-201ENST00000593113 385 ntBASIC1.7□□□□□ -2.14
SPG11Q96JI7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.7□□□□□ -2.14
SPG11Q96JI7 MTND4P35-201ENST00000604257 1375 ntBASIC1.7□□□□□ -2.14
SPG11Q96JI7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SPG11Q96JI7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SPG11Q96JI7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SPG11Q96JI7 RNU4-41P-201ENST00000364426 143 ntBASIC1.69□□□□□ -2.14
SPG11Q96JI7 AL035405.1-201ENST00000400795 710 ntBASIC1.69□□□□□ -2.14
SPG11Q96JI7 AC013404.1-201ENST00000413068 249 ntBASIC1.69□□□□□ -2.14
SPG11Q96JI7 PIGFP3-201ENST00000441918 722 ntBASIC1.69□□□□□ -2.14
SPG11Q96JI7 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.69□□□□□ -2.14
SPG11Q96JI7 BX322784.1-201ENST00000455793 1077 ntBASIC1.69□□□□□ -2.14
SPG11Q96JI7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SPG11Q96JI7 TEX21P-201ENST00000447107 1476 ntBASIC1.69□□□□□ -2.14
SPG11Q96JI7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SPG11Q96JI7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SPG11Q96JI7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.69□□□□□ -2.14
SPG11Q96JI7 HMGB1P27-201ENST00000431429 603 ntBASIC1.69□□□□□ -2.14
SPG11Q96JI7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.69□□□□□ -2.14
SPG11Q96JI7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.69□□□□□ -2.14
SPG11Q96JI7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.69□□□□□ -2.14
SPG11Q96JI7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.69□□□□□ -2.14
SPG11Q96JI7 TPMTP1-201ENST00000592307 737 ntBASIC1.69□□□□□ -2.14
SPG11Q96JI7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.69□□□□□ -2.14
SPG11Q96JI7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SPG11Q96JI7 AC006378.2-201ENST00000623178 2476 ntBASIC1.69□□□□□ -2.14
SPG11Q96JI7 PROS2P-201ENST00000474651 1951 ntBASIC1.69□□□□□ -2.14
SPG11Q96JI7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.69□□□□□ -2.14
SPG11Q96JI7 RNU6-1027P-201ENST00000383998 107 ntBASIC1.68□□□□□ -2.14
SPG11Q96JI7 EI24P1-201ENST00000416584 867 ntBASIC1.68□□□□□ -2.14
SPG11Q96JI7 AIMP1P1-201ENST00000418670 937 ntBASIC1.68□□□□□ -2.14
SPG11Q96JI7 FABP5P13-201ENST00000452144 328 ntBASIC1.68□□□□□ -2.14
SPG11Q96JI7 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.68□□□□□ -2.14
SPG11Q96JI7 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.68□□□□□ -2.14
SPG11Q96JI7 NF1P5-201ENST00000588287 448 ntBASIC1.68□□□□□ -2.14
SPG11Q96JI7 AC092650.2-201ENST00000619984 902 ntBASIC1.68□□□□□ -2.14
SPG11Q96JI7 MIR6132-201ENST00000622083 109 ntBASIC1.68□□□□□ -2.14
SPG11Q96JI7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC1.68□□□□□ -2.14
SPG11Q96JI7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SPG11Q96JI7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SPG11Q96JI7 RPS7P2-201ENST00000435134 607 ntBASIC1.68□□□□□ -2.14
SPG11Q96JI7 RPL36AP6-201ENST00000435770 321 ntBASIC1.68□□□□□ -2.14
SPG11Q96JI7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.68□□□□□ -2.14
SPG11Q96JI7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.68□□□□□ -2.14
SPG11Q96JI7 MTAPP1-201ENST00000489154 819 ntBASIC1.68□□□□□ -2.14
SPG11Q96JI7 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
SPG11Q96JI7 ARL4AP2-201ENST00000507378 601 ntBASIC1.68□□□□□ -2.14
SPG11Q96JI7 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.68□□□□□ -2.14
SPG11Q96JI7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.68□□□□□ -2.14
SPG11Q96JI7 AC095050.2-201ENST00000510748 1458 ntBASIC1.68□□□□□ -2.14
SPG11Q96JI7 MTCO1P7-201ENST00000419523 1542 ntBASIC1.67□□□□□ -2.14
SPG11Q96JI7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SPG11Q96JI7 AL133412.1-201ENST00000380194 2992 ntBASIC1.67□□□□□ -2.14
SPG11Q96JI7 RNU6-882P-201ENST00000391025 103 ntBASIC1.67□□□□□ -2.14
SPG11Q96JI7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 SAR1AP4-201ENST00000429225 591 ntBASIC1.67□□□□□ -2.14
SPG11Q96JI7 MED6P1-201ENST00000439659 713 ntBASIC1.67□□□□□ -2.14
SPG11Q96JI7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SPG11Q96JI7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 MIR151B-201ENST00000584249 96 ntBASIC1.67□□□□□ -2.14
SPG11Q96JI7 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 AL021368.2-201ENST00000606125 5352 ntBASIC1.67□□□□□ -2.14
SPG11Q96JI7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SPG11Q96JI7 AL139811.1-201ENST00000424779 2299 ntBASIC1.67□□□□□ -2.14
SPG11Q96JI7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.67□□□□□ -2.14
SPG11Q96JI7 RN7SKP123-201ENST00000410732 291 ntBASIC1.67□□□□□ -2.14
SPG11Q96JI7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 AL138799.3-201ENST00000438968 350 ntBASIC1.67□□□□□ -2.14
SPG11Q96JI7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 MIR3683-201ENST00000580847 82 ntBASIC1.67□□□□□ -2.14
SPG11Q96JI7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 SNRPGP19-201ENST00000603826 189 ntBASIC1.67□□□□□ -2.14
SPG11Q96JI7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.67□□□□□ -2.14
SPG11Q96JI7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SPG11Q96JI7 MIR548J-201ENST00000408833 112 ntBASIC1.66□□□□□ -2.14
SPG11Q96JI7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
SPG11Q96JI7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.66□□□□□ -2.14
SPG11Q96JI7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.66□□□□□ -2.14
SPG11Q96JI7 snoU109.4-201ENST00000458953 143 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms