Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHFRQ96EP1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHFRQ96EP1 MIR369-201ENST00000362155 70 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 RNU1-64P-201ENST00000365443 163 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 RNU6-43P-201ENST00000384302 107 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 MIR525-201ENST00000384978 85 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 RPL23AP47-201ENST00000408017 460 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 RNU2-39P-201ENST00000410604 198 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 RPS12P23-201ENST00000419579 400 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 ISCA1P6-201ENST00000427740 390 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 Z82205.1-201ENST00000428456 297 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 RPL7P54-201ENST00000438336 674 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 AL359073.1-201ENST00000448036 403 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 AC132479.1-201ENST00000449160 144 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 AC104306.1-201ENST00000449702 371 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 SNORD19B-201ENST00000459623 84 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 AC104687.1-201ENST00000485829 412 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 RPL36AP51-201ENST00000487216 318 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 PTP4A1P4-201ENST00000512479 322 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 AC017037.2-201ENST00000513850 890 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 COX6CP5-201ENST00000527162 228 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 OR5BN1P-201ENST00000532955 829 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 AC034105.4-201ENST00000568304 277 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 BPIFA4P-203ENST00000603168 689 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 AC079587.1-201ENST00000603846 277 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 PRELID3BP8-201ENST00000604148 295 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 AC099669.2-201ENST00000616549 437 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 AC068722.2-201ENST00000618734 544 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 PISRT1-201ENST00000626175 531 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 U6.107-201ENST00000637108 79 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 AC119674.1-207ENST00000641355 633 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 MTND4P1-201ENST00000457501 1466 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 AC024560.2-201ENST00000507981 1497 ntBASIC4.53□□□□□ -1.68
CHFRQ96EP1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHFRQ96EP1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHFRQ96EP1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.53□□□□□ -1.68
CHFRQ96EP1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.53□□□□□ -1.69
CHFRQ96EP1 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.53□□□□□ -1.69
CHFRQ96EP1 LARP1BP1-201ENST00000506036 1359 ntBASIC4.53□□□□□ -1.69
CHFRQ96EP1 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHFRQ96EP1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHFRQ96EP1 AL122126.1-201ENST00000546905 1318 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.52□□□□□ -1.69
CHFRQ96EP1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHFRQ96EP1 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CHFRQ96EP1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHFRQ96EP1 ASNSP1-204ENST00000641977 1664 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.52□□□□□ -1.69
CHFRQ96EP1 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHFRQ96EP1 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CHFRQ96EP1 RNU1-94P-201ENST00000362627 173 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 RNU6-1309P-201ENST00000363305 108 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 Y_RNA.157-201ENST00000363638 102 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 Y_RNA.159-201ENST00000363674 87 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 Y_RNA.401-201ENST00000383965 117 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 RNU6-533P-201ENST00000384144 107 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 MIR3065-201ENST00000390137 79 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 RNU6-1300P-201ENST00000391046 108 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.52□□□□□ -1.69
CHFRQ96EP1 RPL5P18-201ENST00000406671 891 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 SNORA11F-201ENST00000408237 128 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CHFRQ96EP1 AC113618.1-201ENST00000416747 285 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 RPL36AP36-201ENST00000418616 301 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 MTCO3P46-201ENST00000425787 232 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 SKP1P3-201ENST00000429280 487 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 AL513175.1-201ENST00000431492 780 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 RPS26P2-201ENST00000440331 348 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 Z98949.2-201ENST00000440996 144 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 CBWD4P-201ENST00000445695 655 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 AC006480.1-201ENST00000449887 378 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 AC108751.2-201ENST00000469993 231 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.52□□□□□ -1.69
CHFRQ96EP1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.52□□□□□ -1.69
CHFRQ96EP1 AL163540.1-201ENST00000485382 386 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.52□□□□□ -1.69
CHFRQ96EP1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.52□□□□□ -1.69
CHFRQ96EP1 AC020593.1-201ENST00000507399 299 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 AC008958.1-201ENST00000511047 682 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.52□□□□□ -1.69
CHFRQ96EP1 AC018797.3-201ENST00000513388 1241 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 RNU2-46P-201ENST00000517038 113 ntBASIC4.52□□□□□ -1.69
CHFRQ96EP1 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.52□□□□□ -1.69
CHFRQ96EP1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms