Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC006946.1-201ENST00000429106 328 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 MTND3P9-201ENST00000429526 346 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 AC091390.1-201ENST00000433904 331 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 AL049745.1-201ENST00000433953 286 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 HMGN2P13-201ENST00000476476 274 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-CQ95604 AC023818.1-201ENST00000498379 384 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
HLA-CQ95604 RNU6-914P-201ENST00000516749 109 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 AP004607.2-201ENST00000533949 322 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 AC093023.1-201ENST00000547375 507 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-CQ95604 TXNP4-201ENST00000575018 310 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 Z83818.1-201ENST00000603584 150 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 MIR3976-201ENST00000606807 139 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 SNORD91B-202ENST00000608459 222 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 U1.25-201ENST00000614085 162 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 SNORD39.4-201ENST00000620099 78 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
HLA-CQ95604 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-CQ95604 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-CQ95604 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-CQ95604 ZNF658B-201ENST00000602828 3408 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-CQ95604 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-CQ95604 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-CQ95604 SAGE2P-201ENST00000420011 2126 ntBASIC6.08□□□□□ -1.44
HLA-CQ95604 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-CQ95604 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-CQ95604 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-CQ95604 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-CQ95604 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-CQ95604 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-CQ95604 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-CQ95604 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-CQ95604 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-CQ95604 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-CQ95604 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
HLA-CQ95604 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-CQ95604 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-CQ95604 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HLA-CQ95604 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-CQ95604 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-CQ95604 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-CQ95604 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-CQ95604 GTF2IP4-201ENST00000453092 2054 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
HLA-CQ95604 Y_RNA.122-201ENST00000363331 96 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 SNORD50.2-201ENST00000365465 70 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HLA-CQ95604 MIR578-201ENST00000384828 96 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-CQ95604 CYCSP33-201ENST00000414485 327 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 AL391219.1-201ENST00000422570 483 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 PPP1R11P2-201ENST00000423543 382 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-CQ95604 BX679664.1-201ENST00000434429 253 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-CQ95604 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-CQ95604 AL450023.1-201ENST00000450868 751 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 AC009963.2-201ENST00000453431 138 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 AP000797.2-201ENST00000475768 606 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 RPL32P33-201ENST00000487023 394 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 MIR2355-201ENST00000517199 87 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 AL442163.3-201ENST00000554110 156 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 MIR4300-201ENST00000581016 96 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-CQ95604 BDH2P1-201ENST00000602288 736 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC6.07□□□□□ -1.44
HLA-CQ95604 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.07□□□□□ -1.44
HLA-CQ95604 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HLA-CQ95604 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
HLA-CQ95604 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-CQ95604 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-CQ95604 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-CQ95604 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HLA-CQ95604 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-CQ95604 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-CQ95604 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-CQ95604 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-CQ95604 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-CQ95604 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-CQ95604 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
HLA-CQ95604 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-CQ95604 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-CQ95604 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-CQ95604 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-CQ95604 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-CQ95604 BIN2P1-201ENST00000504996 1530 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-CQ95604 RNU1-74P-201ENST00000384108 171 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 Y_RNA.534-201ENST00000384599 112 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 MIR613-201ENST00000385248 95 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 Y_RNA.581-201ENST00000391017 97 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-CQ95604 CYP4F30P-202ENST00000420048 405 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC6.06□□□□□ -1.44
HLA-CQ95604 LAMTOR3P1-201ENST00000428620 370 ntBASIC6.06□□□□□ -1.44
HLA-CQ95604 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-CQ95604 AC092573.2-201ENST00000434546 243 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms