Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
TM9SF4Q92544 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.55□□□□□ -1.84
TM9SF4Q92544 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
TM9SF4Q92544 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TM9SF4Q92544 OTUD4P1-201ENST00000237841 3067 ntBASIC3.55□□□□□ -1.84
TM9SF4Q92544 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF4Q92544 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF4Q92544 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF4Q92544 RNU6-1243P-201ENST00000364028 107 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 RNA5SP167-201ENST00000365461 116 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF4Q92544 SNORA75-201ENST00000384158 137 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 RNY3P10-201ENST00000384764 102 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 MIR483-201ENST00000385070 76 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 AL023807.1-201ENST00000407932 359 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 Y_RNA.599-201ENST00000410489 109 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 MTCO3P41-201ENST00000414801 328 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 RPL21P109-201ENST00000422213 475 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC096632.1-201ENST00000427395 310 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 OR4F13P-201ENST00000428478 931 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 USP9YP14-201ENST00000430663 563 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 HMGN2P31-201ENST00000432430 273 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF4Q92544 USP9YP28-201ENST00000435142 589 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 HMGB1P37-201ENST00000439613 609 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 RANP8-201ENST00000444720 713 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 BMI1P1-201ENST00000445879 941 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 ST13P20-201ENST00000447996 1065 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 HMGB3P30-201ENST00000457863 606 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC026410.2-201ENST00000460281 156 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF4Q92544 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC108941.1-201ENST00000502853 530 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC087369.1-201ENST00000520775 996 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 ZNF705CP-201ENST00000530515 889 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 AL391156.1-201ENST00000554965 554 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 PCMTD1P2-201ENST00000565017 355 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC068790.6-201ENST00000602558 258 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 DEFB131E-202ENST00000602581 683 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC005332.10-201ENST00000612725 619 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC099842.1-201ENST00000619919 596 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC025048.6-202ENST00000627667 438 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF4Q92544 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF4Q92544 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF4Q92544 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.54□□□□□ -1.84
TM9SF4Q92544 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TM9SF4Q92544 AC066616.2-201ENST00000559334 1481 ntBASIC3.54□□□□□ -1.84
TM9SF4Q92544 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
TM9SF4Q92544 ZNF33CP-201ENST00000432492 2030 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 RNU6-343P-201ENST00000364709 104 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 RNU6-1119P-201ENST00000384349 108 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 U8.11-201ENST00000384699 133 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 U8.12-201ENST00000384701 133 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 MIR218-2-201ENST00000385006 110 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 MIR199A2-201ENST00000385289 110 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 RPL17P50-201ENST00000396131 546 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 AC069218.2-201ENST00000411665 344 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 AL133384.1-201ENST00000412744 351 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 RPS7P13-201ENST00000413955 498 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 RPL30P2-201ENST00000414021 291 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 CDK8P2-201ENST00000415020 547 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 NUP35P2-201ENST00000416748 943 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 AC083875.1-201ENST00000419509 405 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 HSPD1P21-201ENST00000436541 245 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 MTND4P6-201ENST00000438297 472 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 AL831737.1-201ENST00000441288 271 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 RPS17P13-201ENST00000448974 407 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 SNORD105B-201ENST00000458770 79 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 U8.18-201ENST00000459285 133 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms