Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC079168.2-201ENST00000453977 416 ntBASIC5.03□□□□□ -1.6
DDX1Q92499 AC053481.1-201ENST00000467217 306 ntBASIC5.03□□□□□ -1.6
DDX1Q92499 RPL21P103-201ENST00000479921 488 ntBASIC5.03□□□□□ -1.6
DDX1Q92499 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.03□□□□□ -1.6
DDX1Q92499 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.03□□□□□ -1.6
DDX1Q92499 RNU1-6P-201ENST00000516290 144 ntBASIC5.03□□□□□ -1.6
DDX1Q92499 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.03□□□□□ -1.6
DDX1Q92499 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.03□□□□□ -1.6
DDX1Q92499 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.03□□□□□ -1.6
DDX1Q92499 AC243972.3-201ENST00000539655 198 ntBASIC5.03□□□□□ -1.6
DDX1Q92499 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.03□□□□□ -1.6
DDX1Q92499 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.03□□□□□ -1.6
DDX1Q92499 AL355836.1-201ENST00000555951 870 ntBASIC5.03□□□□□ -1.6
DDX1Q92499 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.03□□□□□ -1.6
DDX1Q92499 AL356432.3-201ENST00000568952 465 ntBASIC5.03□□□□□ -1.6
DDX1Q92499 AC015912.2-201ENST00000571053 181 ntBASIC5.03□□□□□ -1.6
DDX1Q92499 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.03□□□□□ -1.6
DDX1Q92499 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.03□□□□□ -1.6
DDX1Q92499 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.03□□□□□ -1.6
DDX1Q92499 MIR6716-201ENST00000613413 80 ntBASIC5.03□□□□□ -1.6
DDX1Q92499 MIR1302-1-201ENST00000637932 143 ntBASIC5.03□□□□□ -1.6
DDX1Q92499 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DDX1Q92499 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
DDX1Q92499 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DDX1Q92499 MTCO1P24-201ENST00000515438 1558 ntBASIC5.03□□□□□ -1.6
DDX1Q92499 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DDX1Q92499 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
DDX1Q92499 AC009902.3-201ENST00000606235 2172 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 AC027287.1-201ENST00000553115 1453 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.02□□□□□ -1.61
DDX1Q92499 Y_RNA.146-201ENST00000363549 102 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 RNU6-282P-201ENST00000365357 103 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 RNU1-64P-201ENST00000365443 163 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
DDX1Q92499 RNU1-39P-201ENST00000383897 165 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 Y_RNA.474-201ENST00000384341 102 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 RPL23AP32-201ENST00000395315 459 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 AL080315.1-201ENST00000406055 466 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 RN7SKP32-201ENST00000410167 303 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 HMGB3P12-201ENST00000438745 556 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 RPS26P2-201ENST00000440331 348 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.02□□□□□ -1.61
DDX1Q92499 MTND1P12-201ENST00000455231 147 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.02□□□□□ -1.61
DDX1Q92499 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.02□□□□□ -1.61
DDX1Q92499 RPS4XP18-201ENST00000495480 763 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.02□□□□□ -1.61
DDX1Q92499 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.02□□□□□ -1.61
DDX1Q92499 AC093840.1-201ENST00000511599 336 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.02□□□□□ -1.61
DDX1Q92499 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
DDX1Q92499 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.02□□□□□ -1.61
DDX1Q92499 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.02□□□□□ -1.61
DDX1Q92499 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.02□□□□□ -1.61
DDX1Q92499 AL109766.1-201ENST00000555080 552 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.02□□□□□ -1.61
DDX1Q92499 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.02□□□□□ -1.61
DDX1Q92499 MIR3171-201ENST00000584270 74 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 AC068790.5-201ENST00000602741 355 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 AC007792.1-201ENST00000623023 402 ntBASIC5.02□□□□□ -1.61
DDX1Q92499 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
DDX1Q92499 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
DDX1Q92499 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
DDX1Q92499 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
DDX1Q92499 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
DDX1Q92499 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
DDX1Q92499 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
DDX1Q92499 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.01□□□□□ -1.61
DDX1Q92499 DHX40P1-201ENST00000588725 1412 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 AC010928.1-201ENST00000592477 1447 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 RNU6-356P-201ENST00000384140 107 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 RNU6-463P-201ENST00000384340 107 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
DDX1Q92499 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.01□□□□□ -1.61
DDX1Q92499 RNA5SP56-201ENST00000410277 118 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.01□□□□□ -1.61
DDX1Q92499 NCOR1P3-201ENST00000420479 303 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.01□□□□□ -1.61
DDX1Q92499 AL353678.1-201ENST00000422735 741 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.01□□□□□ -1.61
DDX1Q92499 AC133104.1-201ENST00000429100 218 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 AL365400.1-201ENST00000431854 640 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 NRBF2P3-201ENST00000432731 865 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 RPL7P54-201ENST00000438336 674 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 AL049734.2-201ENST00000441066 616 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 AL136380.1-201ENST00000447970 162 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 AL121877.1-201ENST00000453704 622 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 MTND1P9-201ENST00000453775 944 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 AC104308.1-201ENST00000454621 333 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.01□□□□□ -1.61
DDX1Q92499 SNORD121B-201ENST00000458838 81 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 AC083798.1-201ENST00000472671 131 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.01□□□□□ -1.61
DDX1Q92499 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.01□□□□□ -1.61
DDX1Q92499 Vault.3-201ENST00000516676 95 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 RNU7-30P-201ENST00000516835 62 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 RNU6-445P-201ENST00000516949 107 ntBASIC5.01□□□□□ -1.61
DDX1Q92499 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms