Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 HMGB1P6-201ENST00000569046 646 ntBASIC2.73□□□□□ -1.97
CCDC112Q8NEF3 HSPE1P14-201ENST00000605812 302 ntBASIC2.73□□□□□ -1.97
CCDC112Q8NEF3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC112Q8NEF3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC112Q8NEF3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CCDC112Q8NEF3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC112Q8NEF3 RNU6-859P-201ENST00000362728 107 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 SNORA41-201ENST00000384675 132 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 AL356057.3-201ENST00000402607 340 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 AL356057.2-201ENST00000403318 432 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 AC098826.1-201ENST00000433943 471 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 RNU6-889P-201ENST00000517189 103 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 OR5AK3P-201ENST00000527486 1297 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 AC079600.2-201ENST00000550076 130 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 NBEAP1-201ENST00000554452 979 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 SERPINE4P-201ENST00000554978 281 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 NUTF2P8-201ENST00000604593 363 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 AC026790.2-201ENST00000606282 430 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 AC242628.1-201ENST00000606810 391 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 LINC00216-201ENST00000623548 1126 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 IGHVIII-44-202ENST00000636235 289 ntBASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
CCDC112Q8NEF3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 RNU1-51P-201ENST00000365345 176 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 MIR144-201ENST00000384886 86 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 MT-TC-201ENST00000387405 66 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 FAT1P1-201ENST00000406588 507 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 Z86062.1-201ENST00000406773 777 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 USP9YP27-201ENST00000418455 438 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 OFD1P18Y-201ENST00000420889 959 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 AL513328.1-201ENST00000446460 224 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 RPL23AP15-201ENST00000450202 459 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 AL109933.2-201ENST00000452651 260 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 SNORD109B-201ENST00000458961 67 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 SNORD109A-201ENST00000459128 67 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 CYCSP39-201ENST00000565821 309 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 AC019159.1-201ENST00000605094 187 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 AC009570.1-201ENST00000609599 745 ntBASIC2.71□□□□□ -1.98
CCDC112Q8NEF3 AC011460.1-201ENST00000636268 1834 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 RNA5SP258-201ENST00000362750 119 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 AL592148.1-201ENST00000413568 445 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 PTP4A1P3-201ENST00000433661 420 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 RPL32P28-201ENST00000443577 397 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 RN7SL429P-201ENST00000479090 223 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 RN7SL489P-201ENST00000486185 223 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 RN7SL327P-201ENST00000488659 223 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 RPL37P25-201ENST00000507308 276 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 AC112673.1-201ENST00000513168 575 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 RN7SKP132-201ENST00000516001 208 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 AL442163.2-201ENST00000553912 710 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 EIF5A2P1-201ENST00000564027 460 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 MIR5194-201ENST00000582634 120 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 AC020895.1-201ENST00000595362 272 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 SUMO2P14-201ENST00000604488 293 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 RN7SL853P-201ENST00000617250 223 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 AC092608.2-201ENST00000624427 218 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.7□□□□□ -1.98
CCDC112Q8NEF3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 SNORD62.1-201ENST00000362541 86 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AL360182.1-201ENST00000397433 468 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AL031679.1-201ENST00000400616 525 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms