Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RBMY1HP-201ENST00000382759 1389 ntBASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CCDC116Q8IYX3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 AC092747.4-201ENST00000620519 1861 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 RNU6-81P-201ENST00000365608 104 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 RNU6-1027P-201ENST00000383998 107 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 SNORA70.9-201ENST00000384370 135 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 MIR578-201ENST00000384828 96 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 MIR323B-201ENST00000385269 82 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 RNU6-817P-201ENST00000391083 104 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 MYL6P5-201ENST00000412707 459 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 AC092573.2-201ENST00000434546 243 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 SDC4P-201ENST00000453285 601 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 AL133445.1-201ENST00000467051 452 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 RN7SKP288-201ENST00000516227 268 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 snoU109.6-201ENST00000516831 118 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 FTH1P11-201ENST00000517577 551 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 MRPS36P4-201ENST00000534436 298 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 MIR4310-201ENST00000582950 57 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 Z83818.1-201ENST00000603584 150 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 AC124916.2-201ENST00000604416 224 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 AP001485.1-201ENST00000604799 199 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 MIR6780B-201ENST00000610307 79 ntBASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC116Q8IYX3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC116Q8IYX3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.65□□□□□ -1.51
CCDC116Q8IYX3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC116Q8IYX3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
CCDC116Q8IYX3 OR9K1P-202ENST00000641111 3217 ntBASIC5.65□□□□□ -1.51
CCDC116Q8IYX3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 STX3-208ENST00000641815 3236 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 RNU6-858P-201ENST00000362436 107 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 SNORD1C-201ENST00000363315 78 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 GNG5P2-201ENST00000372054 207 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 RNU6-339P-201ENST00000384310 107 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 Y_RNA.581-201ENST00000391017 97 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 U3.35-201ENST00000408405 208 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 RNU2-20P-201ENST00000410425 191 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 AC245096.1-201ENST00000413104 546 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 RPS15AP40-201ENST00000419621 391 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 RPS24P16-201ENST00000497294 392 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 RN7SKP67-201ENST00000515905 235 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 RN7SKP183-201ENST00000517169 324 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 AC091144.1-201ENST00000519573 138 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 SYF2P1-201ENST00000550658 413 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 MIR5696-201ENST00000578474 85 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 MIR6130-201ENST00000619419 109 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 AC243829.7-201ENST00000633081 225 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 ZNF285B-201ENST00000561698 1767 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 THAP12P9-201ENST00000503971 2360 ntBASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC116Q8IYX3 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms