Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 OR5BR1P-201ENST00000524992 1330 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 SRP72P2-201ENST00000344851 1979 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 TAS2R15P-201ENST00000390674 928 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 RSL24D1P4-201ENST00000400938 484 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 RPS25P9-201ENST00000435591 252 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 RPL23AP22-201ENST00000437556 453 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 RN7SL601P-201ENST00000471221 293 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC092185.1-201ENST00000491371 97 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC098862.1-201ENST00000504991 413 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 XKRY-201ENST00000510392 1100 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC006499.2-201ENST00000513470 337 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 RNY4P37-201ENST00000516225 96 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 RN7SKP57-201ENST00000517248 293 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC004024.1-201ENST00000549244 247 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC011611.1-201ENST00000552179 197 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 MIR5186-201ENST00000577504 120 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC090616.5-202ENST00000582111 297 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AL669831.4-202ENST00000590817 238 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 IGHV3-29-201ENST00000604817 344 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC112220.3-201ENST00000605502 502 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AC008147.4-201ENST00000617570 1204 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 AL355493.4-201ENST00000618530 292 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 U4.6-201ENST00000621618 127 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 MTND5P24-201ENST00000438892 1767 ntBASIC3.2□□□□□ -1.9
CCDC71Q8IV32 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71Q8IV32 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AL079305.1-201ENST00000623159 3008 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 RNU6-805P-201ENST00000365643 106 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 Y_RNA.493-201ENST00000384422 102 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 RNU6-878P-201ENST00000384578 110 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 RPL23AP29-201ENST00000397284 453 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 RPL31P1-201ENST00000398116 372 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 RSL24D1P3-201ENST00000449255 495 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC097493.1-201ENST00000463958 372 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC090453.1-201ENST00000495560 436 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 MTCYBP35-201ENST00000503630 1137 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC005921.1-201ENST00000510589 286 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 SNORA3.4-201ENST00000515969 96 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 RN7SKP289-201ENST00000517244 295 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 DEFB131D-201ENST00000526803 184 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 OR4T1P-201ENST00000554933 911 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 Z99289.3-201ENST00000605586 594 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC009464.1-201ENST00000615731 469 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC110801.1-201ENST00000623590 212 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC010733.2-201ENST00000589496 5702 ntBASIC3.19□□□□□ -1.9
CCDC71Q8IV32 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71Q8IV32 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC71Q8IV32 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms