Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AL390240.1-201ENST00000612950 384 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 AC009039.2-201ENST00000624524 529 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AC011477.1-204ENST00000623416 1325 ntBASIC3.72□□□□□ -1.81
PRPF39Q86UA1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.72□□□□□ -1.81
PRPF39Q86UA1 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 RPL21P32-201ENST00000419877 477 ntBASIC3.72□□□□□ -1.81
PRPF39Q86UA1 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 SNORD105B-201ENST00000458770 79 ntBASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AP001025.2-201ENST00000490908 477 ntBASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AL121766.1-201ENST00000547436 487 ntBASIC3.72□□□□□ -1.81
PRPF39Q86UA1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AC055876.1-202ENST00000567053 138 ntBASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AL353997.4-201ENST00000586196 166 ntBASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AC022022.2-201ENST00000602989 360 ntBASIC3.72□□□□□ -1.81
PRPF39Q86UA1 SRGNP1-201ENST00000603392 451 ntBASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AC002550.2-201ENST00000621246 394 ntBASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AP000553.6-201ENST00000641242 118 ntBASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AC007656.2-201ENST00000624902 4547 ntBASIC3.72□□□□□ -1.81
PRPF39Q86UA1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.72□□□□□ -1.81
PRPF39Q86UA1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF39Q86UA1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
PRPF39Q86UA1 MFSD8-236ENST00000641509 4050 ntBASIC3.71□□□□□ -1.81
PRPF39Q86UA1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 RNU6-462P-201ENST00000362659 105 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 RNA5SP42-201ENST00000364278 115 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 RNU4-28P-201ENST00000364739 141 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 RNU6-744P-201ENST00000365557 107 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 RNU6-1316P-201ENST00000384242 108 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 MIR34B-201ENST00000385076 84 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 PTMAP5-201ENST00000393073 333 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 ATP5A1P2-201ENST00000412323 255 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 AC245054.1-201ENST00000420944 258 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 BX119904.4-201ENST00000424402 301 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 RPL30P9-201ENST00000465586 330 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 RPS27AP1-201ENST00000475545 471 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 RPL7P23-201ENST00000493874 747 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 AC022483.1-201ENST00000514020 567 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 AC023161.2-201ENST00000551218 780 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 AP005205.1-201ENST00000563503 508 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 AL158211.4-201ENST00000606988 584 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 AC008121.2-201ENST00000614647 523 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 AL607023.1-201ENST00000620045 248 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 AC008443.7-201ENST00000622195 246 ntBASIC3.71□□□□□ -1.82
PRPF39Q86UA1 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.71□□□□□ -1.82
PRPF39Q86UA1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 RNA5SP72-201ENST00000364442 117 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 RNU6-253P-201ENST00000384730 105 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 MTHFD2P2-201ENST00000407725 247 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 RPS3AP24-201ENST00000407896 734 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 RN7SKP53-201ENST00000411337 315 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AC109780.2-201ENST00000413467 845 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.7□□□□□ -1.82
PRPF39Q86UA1 MTCO2P17-201ENST00000424336 677 ntBASIC3.7□□□□□ -1.82
PRPF39Q86UA1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms