Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.42□□□□□ -1.86
C9orf139Q6ZV77 AC092447.10-201ENST00000620607 1652 ntBASIC3.42□□□□□ -1.86
C9orf139Q6ZV77 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf139Q6ZV77 AC105074.1-201ENST00000623380 3095 ntBASIC3.42□□□□□ -1.86
C9orf139Q6ZV77 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.42□□□□□ -1.86
C9orf139Q6ZV77 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
C9orf139Q6ZV77 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
C9orf139Q6ZV77 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf139Q6ZV77 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 OR5J1P-201ENST00000313544 939 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AL161781.1-201ENST00000354277 403 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 MIR372-201ENST00000362225 67 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 RN7SKP44-201ENST00000363602 316 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 RNU6-730P-201ENST00000383954 104 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 RNU6-1103P-201ENST00000384150 107 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 MIR1250-201ENST00000408098 113 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 RPL31P2-201ENST00000413849 377 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC004987.3-201ENST00000413879 771 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 MTATP6P27-201ENST00000416987 621 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC012065.2-201ENST00000421295 375 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AL353777.1-201ENST00000425552 326 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 NANOGP6-201ENST00000429190 847 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 RPL31P35-201ENST00000431058 377 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC104850.1-201ENST00000435940 476 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 ARPC3P1-201ENST00000437218 533 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 NDUFS5P3-201ENST00000450668 321 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 C1DP4-201ENST00000455429 424 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 RPL21P129-201ENST00000491732 478 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 RN7SL604P-201ENST00000492589 296 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC093853.1-201ENST00000515689 483 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC008694.2-201ENST00000517591 306 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC118273.2-201ENST00000532092 465 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC107954.1-201ENST00000565906 727 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC006504.3-201ENST00000586818 523 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 NRBF2P1-201ENST00000587407 859 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AL391813.2-201ENST00000609113 322 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC091905.1-201ENST00000624400 311 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC008013.2-202ENST00000637965 364 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 MTCO1P24-201ENST00000515438 1558 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 AC087190.4-201ENST00000574616 8334 ntBASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
C9orf139Q6ZV77 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.4□□□□□ -1.86
C9orf139Q6ZV77 AC092125.1-201ENST00000562568 1995 ntBASIC3.4□□□□□ -1.86
C9orf139Q6ZV77 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.4□□□□□ -1.86
C9orf139Q6ZV77 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
C9orf139Q6ZV77 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
C9orf139Q6ZV77 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
C9orf139Q6ZV77 RNU1-108P-201ENST00000362556 161 ntBASIC3.4□□□□□ -1.87
C9orf139Q6ZV77 RNY4P14-201ENST00000363656 96 ntBASIC3.4□□□□□ -1.87
C9orf139Q6ZV77 RNU6-1090P-201ENST00000364065 94 ntBASIC3.4□□□□□ -1.87
C9orf139Q6ZV77 RNA5SP130-201ENST00000364431 114 ntBASIC3.4□□□□□ -1.87
C9orf139Q6ZV77 SNORD82-201ENST00000365530 70 ntBASIC3.4□□□□□ -1.87
C9orf139Q6ZV77 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
C9orf139Q6ZV77 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
C9orf139Q6ZV77 Y_RNA.409-201ENST00000383990 98 ntBASIC3.4□□□□□ -1.87
C9orf139Q6ZV77 MIR134-201ENST00000385258 73 ntBASIC3.4□□□□□ -1.87
C9orf139Q6ZV77 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.4□□□□□ -1.87
C9orf139Q6ZV77 AL356421.1-201ENST00000403255 413 ntBASIC3.4□□□□□ -1.87
C9orf139Q6ZV77 AL121834.1-202ENST00000404494 277 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms