Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 ROCK1P1-201ENST00000573767 549 ntBASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 AC053481.3-201ENST00000577881 843 ntBASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 AL009028.1-201ENST00000604895 802 ntBASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 AL365503.1-201ENST00000605247 905 ntBASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 AL109618.2-201ENST00000605527 211 ntBASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 AL390208.1-201ENST00000605885 644 ntBASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 AC006065.5-201ENST00000623427 349 ntBASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
SYNE3Q6ZMZ3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 Y_RNA.97-201ENST00000363094 102 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 Y_RNA.201-201ENST00000364052 96 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 RNU6-501P-201ENST00000364072 100 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 RNA5SP51-201ENST00000364750 119 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 RNU6-761P-201ENST00000384148 107 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 PTMAP5-201ENST00000393073 333 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 RPL21P17-201ENST00000397467 475 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 PSMA6P3-201ENST00000428242 164 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AL590233.1-201ENST00000430017 456 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 HSPE1P28-201ENST00000443139 211 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 TAF9P1-201ENST00000445421 515 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AC002381.1-201ENST00000447049 280 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AL359073.1-201ENST00000448036 403 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AC005297.2-201ENST00000450430 606 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 KATNBL1P6-201ENST00000453433 915 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 TAF9P2-201ENST00000454958 515 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AL136097.1-201ENST00000456945 913 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 DSTNP2-201ENST00000504533 515 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AC021678.1-201ENST00000505195 936 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AC022447.3-201ENST00000506865 495 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 POU5F1P7-201ENST00000508759 541 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AC117532.1-201ENST00000514638 323 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 RN7SKP18-201ENST00000516005 275 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 PAICSP4-201ENST00000517543 1253 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AC023632.4-201ENST00000517783 191 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 RANP9-201ENST00000519957 271 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AP003385.6-201ENST00000531603 374 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AC010591.1-201ENST00000603941 649 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 BCRP9-201ENST00000605312 388 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AL158063.1-201ENST00000615349 536 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AL356266.1-201ENST00000623311 483 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 AL353746.1-201ENST00000566293 6881 ntBASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYNE3Q6ZMZ3 RPS4XP5-202ENST00000449995 1334 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AC006378.2-201ENST00000623178 2476 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 RNU6-989P-201ENST00000362756 107 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AL365184.2-201ENST00000431139 435 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 SNORD105B-201ENST00000458770 79 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 snoU109.4-201ENST00000458953 143 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AP001992.1-205ENST00000462248 379 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AC087312.1-201ENST00000471411 480 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AC078785.3-201ENST00000476607 425 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AL049830.2-201ENST00000480072 201 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AC106872.3-201ENST00000495104 446 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AC091489.2-201ENST00000566263 604 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AC012435.1-202ENST00000568772 240 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AC004223.2-201ENST00000590309 544 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AL669831.4-202ENST00000590817 238 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms