Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
ATL3Q6DD88 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.2□□□□□ -1.9
ATL3Q6DD88 SNORA71.3-201ENST00000362582 128 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 SNORD21-201ENST00000383953 95 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ATL3Q6DD88 RPL5P18-201ENST00000406671 891 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 RPS3AP25-201ENST00000411660 793 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.2□□□□□ -1.9
ATL3Q6DD88 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.2□□□□□ -1.9
ATL3Q6DD88 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATL3Q6DD88 AC241584.1-201ENST00000438469 1241 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 PTGES3P1-201ENST00000439531 483 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 NDUFA5P7-201ENST00000452914 242 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 RPS20P24-201ENST00000457473 361 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 AC010301.1-201ENST00000473936 355 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 AC084024.2-201ENST00000503480 791 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATL3Q6DD88 AC004062.1-201ENST00000509926 645 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 SCGB1D5P-201ENST00000515134 247 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.2□□□□□ -1.9
ATL3Q6DD88 AC018630.1-201ENST00000541376 925 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.2□□□□□ -1.9
ATL3Q6DD88 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.2□□□□□ -1.9
ATL3Q6DD88 AC093519.1-201ENST00000566109 298 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.2□□□□□ -1.9
ATL3Q6DD88 AC104072.1-201ENST00000568817 668 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.2□□□□□ -1.9
ATL3Q6DD88 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.2□□□□□ -1.9
ATL3Q6DD88 AC073387.2-201ENST00000604797 784 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 AC008277.2-201ENST00000605196 797 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.2□□□□□ -1.9
ATL3Q6DD88 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATL3Q6DD88 AC084757.4-201ENST00000616350 526 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 AC012314.7-201ENST00000619693 93 ntBASIC3.2□□□□□ -1.9
ATL3Q6DD88 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.2□□□□□ -1.9
ATL3Q6DD88 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
ATL3Q6DD88 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATL3Q6DD88 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
ATL3Q6DD88 RPL7P27-201ENST00000403775 720 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.19□□□□□ -1.9
ATL3Q6DD88 AC096533.1-201ENST00000411645 353 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 AC109780.2-201ENST00000413467 845 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 RPL21P32-201ENST00000419877 477 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 RPS20P5-201ENST00000434808 360 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATL3Q6DD88 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.19□□□□□ -1.9
ATL3Q6DD88 snoU109.4-201ENST00000458953 143 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 AC008427.1-201ENST00000503102 655 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 KLRA1P-201ENST00000503499 986 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.19□□□□□ -1.9
ATL3Q6DD88 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.19□□□□□ -1.9
ATL3Q6DD88 MTCO3P15-201ENST00000526563 574 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.19□□□□□ -1.9
ATL3Q6DD88 AC044913.1-201ENST00000557200 430 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.19□□□□□ -1.9
ATL3Q6DD88 GAS5-AS1-201ENST00000602767 694 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 AC024153.1-201ENST00000603103 365 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 AC006329.2-201ENST00000611491 394 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 AC068831.7-201ENST00000616954 363 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 AL360181.4-201ENST00000621752 134 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 AL138960.2-201ENST00000625145 535 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 AC106858.1-201ENST00000637497 429 ntBASIC3.19□□□□□ -1.9
ATL3Q6DD88 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATL3Q6DD88 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 AC092435.3-201ENST00000565538 3654 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 RNU6-1176P-201ENST00000390955 107 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 MTCO1P56-201ENST00000401674 224 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 AL031121.1-201ENST00000406553 254 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 PTP4A1P7-201ENST00000423476 514 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 SETP8-201ENST00000435341 628 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 PABPC1P3-201ENST00000469174 459 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 AC008837.1-201ENST00000511513 412 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 AC019227.1-201ENST00000526902 510 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 AL133271.1-201ENST00000538229 291 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 ELOCP31-201ENST00000540463 467 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 BNIP3P31-201ENST00000604515 566 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 AP003973.1-201ENST00000604639 691 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 AC005014.3-201ENST00000605985 190 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 AL592148.2-201ENST00000612210 372 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 AL392048.1-201ENST00000613946 534 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 AL157770.1-201ENST00000623049 439 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 AC010872.1-201ENST00000624225 675 ntBASIC3.18□□□□□ -1.9
ATL3Q6DD88 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.18□□□□□ -1.9
ATL3Q6DD88 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ATL3Q6DD88 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms