Protein–RNA interactions for Protein: Q16740

CLPP, ATP-dependent Clp protease proteolytic subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPPQ16740 AL513175.2-201ENST00000422071 443 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 AL139281.1-201ENST00000422120 335 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 MTCO2P23-201ENST00000425216 680 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.32□□□□□ -1.88
CLPPQ16740 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPPQ16740 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.32□□□□□ -1.88
CLPPQ16740 RPL23AP74-201ENST00000437246 471 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 AC006028.1-201ENST00000438379 402 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 MTCO2P25-201ENST00000447065 681 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 RPL39P6-201ENST00000448289 150 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPPQ16740 BX510359.1-201ENST00000456973 237 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 RPL21P13-201ENST00000488305 481 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 AC134050.1-201ENST00000495088 933 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPPQ16740 KCTD9P5-201ENST00000504141 1170 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.32□□□□□ -1.88
CLPPQ16740 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPPQ16740 IGKV2-26-201ENST00000518305 343 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.32□□□□□ -1.88
CLPPQ16740 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPPQ16740 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.32□□□□□ -1.88
CLPPQ16740 AL132657.2-201ENST00000564417 358 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 AC245036.5-201ENST00000596330 847 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPPQ16740 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPPQ16740 AL627309.6-201ENST00000606857 840 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 RNU4-5P-201ENST00000607255 135 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 AC092650.2-201ENST00000619984 902 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.32□□□□□ -1.88
CLPPQ16740 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.32□□□□□ -1.88
CLPPQ16740 OR4G3P-201ENST00000633500 913 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.32□□□□□ -1.88
CLPPQ16740 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.32□□□□□ -1.88
CLPPQ16740 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLPPQ16740 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLPPQ16740 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.32□□□□□ -1.88
CLPPQ16740 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLPPQ16740 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLPPQ16740 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLPPQ16740 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CLPPQ16740 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLPPQ16740 RNA5SP42-201ENST00000364278 115 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 RNA5SP235-201ENST00000365411 114 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 Y_RNA.408-201ENST00000383987 102 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 SNRPEP2-201ENST00000397592 279 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 AL590084.1-201ENST00000407885 387 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 RAD23BP2-201ENST00000416003 1207 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 MRPL50P2-201ENST00000416821 482 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.31□□□□□ -1.88
CLPPQ16740 AC005300.1-201ENST00000428401 373 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 SNRPEP4-201ENST00000435815 279 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.31□□□□□ -1.88
CLPPQ16740 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.31□□□□□ -1.88
CLPPQ16740 AC092427.1-201ENST00000439177 601 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 CYCSP32-201ENST00000440548 321 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.31□□□□□ -1.88
CLPPQ16740 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.31□□□□□ -1.88
CLPPQ16740 HMGB1P15-201ENST00000453854 435 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 BTF3P5-201ENST00000457252 467 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 HMGB1P28-201ENST00000507778 552 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLPPQ16740 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.31□□□□□ -1.88
CLPPQ16740 AC008837.2-201ENST00000513076 418 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 SNORA31.20-201ENST00000517111 133 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 AC104986.1-201ENST00000517978 436 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.31□□□□□ -1.88
CLPPQ16740 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.31□□□□□ -1.88
CLPPQ16740 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.31□□□□□ -1.88
CLPPQ16740 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.31□□□□□ -1.88
CLPPQ16740 HSPE1P3-201ENST00000559254 309 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 AADACP1-206ENST00000561502 1193 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.31□□□□□ -1.88
CLPPQ16740 MIR4637-201ENST00000582405 84 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 AC245884.10-201ENST00000597355 337 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.31□□□□□ -1.88
CLPPQ16740 AC022960.3-201ENST00000619794 441 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 MIR8057-201ENST00000620957 69 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 AC006111.3-201ENST00000622137 383 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 AC091925.2-201ENST00000625059 256 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 AC084035.1-201ENST00000634543 607 ntBASIC3.31□□□□□ -1.88
CLPPQ16740 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.31□□□□□ -1.88
CLPPQ16740 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLPPQ16740 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLPPQ16740 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLPPQ16740 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLPPQ16740 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLPPQ16740 AC106754.1-201ENST00000562632 1513 ntBASIC3.3□□□□□ -1.88
CLPPQ16740 RNU4-68P-201ENST00000364314 141 ntBASIC3.3□□□□□ -1.88
CLPPQ16740 NDUFB4P4-201ENST00000404822 243 ntBASIC3.3□□□□□ -1.88
CLPPQ16740 RNA5SP80-201ENST00000410475 111 ntBASIC3.3□□□□□ -1.88
CLPPQ16740 RNU4-47P-201ENST00000410876 114 ntBASIC3.3□□□□□ -1.88
CLPPQ16740 Z92545.1-201ENST00000411782 234 ntBASIC3.3□□□□□ -1.88
CLPPQ16740 AC068533.2-201ENST00000411872 306 ntBASIC3.3□□□□□ -1.88
CLPPQ16740 MTCO3P12-201ENST00000416718 547 ntBASIC3.3□□□□□ -1.88
CLPPQ16740 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.3□□□□□ -1.88
CLPPQ16740 AC245291.1-201ENST00000419501 328 ntBASIC3.3□□□□□ -1.88
CLPPQ16740 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.3□□□□□ -1.88
CLPPQ16740 NANOGP5-201ENST00000424456 877 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms