Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 MIR6504-201ENST00000613520 61 ntBASIC1.88□□□□□ -2.11
CACNA1EQ15878 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.87□□□□□ -2.11
CACNA1EQ15878 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CACNA1EQ15878 AL513331.1-201ENST00000411908 397 ntBASIC1.87□□□□□ -2.11
CACNA1EQ15878 AC009302.1-201ENST00000417147 390 ntBASIC1.87□□□□□ -2.11
CACNA1EQ15878 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.87□□□□□ -2.11
CACNA1EQ15878 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.87□□□□□ -2.11
CACNA1EQ15878 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.87□□□□□ -2.11
CACNA1EQ15878 AL845331.3-202ENST00000562856 261 ntBASIC1.87□□□□□ -2.11
CACNA1EQ15878 AP001542.2-201ENST00000593141 364 ntBASIC1.87□□□□□ -2.11
CACNA1EQ15878 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.87□□□□□ -2.11
CACNA1EQ15878 AL160237.3-201ENST00000604114 1013 ntBASIC1.87□□□□□ -2.11
CACNA1EQ15878 HMGN2P28-201ENST00000606102 262 ntBASIC1.87□□□□□ -2.11
CACNA1EQ15878 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
CACNA1EQ15878 KPNA2P1-201ENST00000458289 1591 ntBASIC1.87□□□□□ -2.11
CACNA1EQ15878 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CACNA1EQ15878 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CACNA1EQ15878 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.86□□□□□ -2.11
CACNA1EQ15878 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.86□□□□□ -2.11
CACNA1EQ15878 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
CACNA1EQ15878 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CACNA1EQ15878 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.86□□□□□ -2.11
CACNA1EQ15878 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.86□□□□□ -2.11
CACNA1EQ15878 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.86□□□□□ -2.11
CACNA1EQ15878 C2orf27A-204ENST00000623058 969 ntBASIC1.86□□□□□ -2.11
CACNA1EQ15878 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.86□□□□□ -2.11
CACNA1EQ15878 AC091152.2-201ENST00000591628 2569 ntBASIC1.86□□□□□ -2.11
CACNA1EQ15878 RLIMP2-201ENST00000427891 1563 ntBASIC1.86□□□□□ -2.11
CACNA1EQ15878 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.86□□□□□ -2.11
CACNA1EQ15878 RPL23AP44-201ENST00000482216 473 ntBASIC1.86□□□□□ -2.11
CACNA1EQ15878 FAM92A1P1-201ENST00000528023 890 ntBASIC1.86□□□□□ -2.11
CACNA1EQ15878 RN7SL622P-201ENST00000585292 275 ntBASIC1.86□□□□□ -2.11
CACNA1EQ15878 AC013562.2-201ENST00000611632 603 ntBASIC1.86□□□□□ -2.11
CACNA1EQ15878 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CACNA1EQ15878 AC132825.8-201ENST00000640783 297 ntBASIC1.86□□□□□ -2.11
CACNA1EQ15878 HMGB1P10-201ENST00000395823 563 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 RNU2-68P-201ENST00000410878 191 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 AC099336.2-201ENST00000422457 254 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.85□□□□□ -2.11
CACNA1EQ15878 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.85□□□□□ -2.11
CACNA1EQ15878 AC092473.1-201ENST00000441098 221 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.85□□□□□ -2.11
CACNA1EQ15878 RAC1P5-201ENST00000512182 576 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 AC107393.1-201ENST00000512403 346 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 RNA5SP385-201ENST00000515947 110 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 RNA5SP309-201ENST00000516670 106 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 AC073348.1-201ENST00000623002 331 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 LINC00216-201ENST00000623548 1126 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 AC010872.1-201ENST00000624225 675 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CACNA1EQ15878 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CACNA1EQ15878 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CACNA1EQ15878 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CACNA1EQ15878 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CACNA1EQ15878 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.85□□□□□ -2.11
CACNA1EQ15878 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC1.85□□□□□ -2.11
CACNA1EQ15878 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.85□□□□□ -2.11
CACNA1EQ15878 Z73417.1-201ENST00000447373 778 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 AC109486.1-201ENST00000486833 374 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 AC140059.1-201ENST00000489238 361 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 RPS29P11-201ENST00000496507 171 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 MIR3683-201ENST00000580847 82 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 AC006254.3-201ENST00000603353 884 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.85□□□□□ -2.11
CACNA1EQ15878 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.85□□□□□ -2.11
CACNA1EQ15878 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CACNA1EQ15878 Y_RNA.112-201ENST00000363250 102 ntBASIC1.84□□□□□ -2.11
CACNA1EQ15878 AIMP1P1-201ENST00000418670 937 ntBASIC1.84□□□□□ -2.11
CACNA1EQ15878 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.84□□□□□ -2.11
CACNA1EQ15878 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.84□□□□□ -2.11
CACNA1EQ15878 TRMT112P2-201ENST00000512910 132 ntBASIC1.84□□□□□ -2.11
CACNA1EQ15878 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.84□□□□□ -2.11
CACNA1EQ15878 AC026241.1-201ENST00000517873 2142 ntBASIC1.84□□□□□ -2.11
CACNA1EQ15878 DNAJC19P9-201ENST00000555084 351 ntBASIC1.84□□□□□ -2.11
CACNA1EQ15878 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.84□□□□□ -2.11
CACNA1EQ15878 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CACNA1EQ15878 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.84□□□□□ -2.12
CACNA1EQ15878 HIGD1AP11-201ENST00000438361 280 ntBASIC1.84□□□□□ -2.12
CACNA1EQ15878 RNU7-95P-201ENST00000459222 64 ntBASIC1.84□□□□□ -2.12
CACNA1EQ15878 AC104564.1-201ENST00000493028 407 ntBASIC1.84□□□□□ -2.12
CACNA1EQ15878 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.84□□□□□ -2.12
CACNA1EQ15878 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.84□□□□□ -2.12
CACNA1EQ15878 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.84□□□□□ -2.12
CACNA1EQ15878 AC007687.1-201ENST00000602704 304 ntBASIC1.84□□□□□ -2.12
CACNA1EQ15878 AL356575.1-201ENST00000603008 283 ntBASIC1.84□□□□□ -2.12
CACNA1EQ15878 AC083899.3-201ENST00000603413 594 ntBASIC1.84□□□□□ -2.12
CACNA1EQ15878 AC099778.2-201ENST00000610904 211 ntBASIC1.84□□□□□ -2.12
CACNA1EQ15878 AC244517.1-201ENST00000606030 2086 ntBASIC1.84□□□□□ -2.12
CACNA1EQ15878 AP001148.1-201ENST00000624124 2359 ntBASIC1.83□□□□□ -2.12
CACNA1EQ15878 AC092447.7-201ENST00000422212 1621 ntBASIC1.83□□□□□ -2.12
CACNA1EQ15878 Y_RNA.36-201ENST00000362602 112 ntBASIC1.83□□□□□ -2.12
CACNA1EQ15878 RNY1P14-201ENST00000384426 108 ntBASIC1.83□□□□□ -2.12
CACNA1EQ15878 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.83□□□□□ -2.12
CACNA1EQ15878 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.83□□□□□ -2.12
CACNA1EQ15878 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.83□□□□□ -2.12
CACNA1EQ15878 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.83□□□□□ -2.12
CACNA1EQ15878 YWHAZP7-201ENST00000436906 631 ntBASIC1.83□□□□□ -2.12
CACNA1EQ15878 AC007536.1-201ENST00000533382 349 ntBASIC1.83□□□□□ -2.12
CACNA1EQ15878 AC004486.1-201ENST00000546846 233 ntBASIC1.83□□□□□ -2.12
CACNA1EQ15878 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms