Protein–RNA interactions for Protein: Q12996

CSTF3, Cleavage stimulation factor subunit 3, humanhuman

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3Q12996 SNORA26.8-201ENST00000391306 124 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 MTCYBP36-201ENST00000404146 440 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 NPM1P11-201ENST00000417106 855 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CSTF3Q12996 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.72□□□□□ -1.81
CSTF3Q12996 VDAC1P3-201ENST00000434069 851 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.72□□□□□ -1.81
CSTF3Q12996 THAP5P1-201ENST00000439089 262 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.72□□□□□ -1.81
CSTF3Q12996 AL359073.1-201ENST00000448036 403 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.72□□□□□ -1.81
CSTF3Q12996 AC010468.1-201ENST00000461022 817 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 RN7SL93P-201ENST00000463035 293 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 RPS7P7-201ENST00000463499 571 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 AC092754.2-201ENST00000463506 460 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CSTF3Q12996 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.72□□□□□ -1.81
CSTF3Q12996 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.72□□□□□ -1.81
CSTF3Q12996 OR5BM1P-201ENST00000512021 366 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.72□□□□□ -1.81
CSTF3Q12996 NDUFA5P2-201ENST00000519723 344 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.72□□□□□ -1.81
CSTF3Q12996 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.72□□□□□ -1.81
CSTF3Q12996 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.72□□□□□ -1.81
CSTF3Q12996 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.72□□□□□ -1.81
CSTF3Q12996 SETP2-201ENST00000553886 926 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 AC136624.4-201ENST00000573044 370 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 FAM60BP-201ENST00000578364 658 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 AC060771.1-201ENST00000582031 164 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 AC008507.1-201ENST00000587506 734 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 TPMTP1-201ENST00000592307 737 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 AC110760.3-201ENST00000598794 467 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 AC010620.1-201ENST00000601088 1102 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 AL022099.1-201ENST00000604551 712 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 AL591034.3-201ENST00000605511 685 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.72□□□□□ -1.81
CSTF3Q12996 AL158211.4-201ENST00000606988 584 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 AC012360.2-201ENST00000609349 391 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 XIST_intron.1-201ENST00000619444 68 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 AL590240.3-201ENST00000621416 943 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 AL360181.4-201ENST00000621752 134 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CSTF3Q12996 ELL2P3-201ENST00000457883 1602 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 AC092125.1-201ENST00000562568 1995 ntBASIC3.72□□□□□ -1.81
CSTF3Q12996 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CSTF3Q12996 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CSTF3Q12996 RLIMP1-201ENST00000339626 1680 ntBASIC3.71□□□□□ -1.81
CSTF3Q12996 RPS4XP5-202ENST00000449995 1334 ntBASIC3.71□□□□□ -1.81
CSTF3Q12996 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
CSTF3Q12996 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CSTF3Q12996 CCT4P2-201ENST00000233836 1548 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CSTF3Q12996 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
CSTF3Q12996 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CSTF3Q12996 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.71□□□□□ -1.82
CSTF3Q12996 RNA5SP97-201ENST00000365006 84 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CSTF3Q12996 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CSTF3Q12996 RNU6-809P-201ENST00000384461 107 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 RNU6-882P-201ENST00000391025 103 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CSTF3Q12996 RPL21P65-201ENST00000406094 466 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 RNU2-43P-201ENST00000410306 190 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 AC007390.1-201ENST00000415722 356 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 DUTP6-201ENST00000425573 462 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.71□□□□□ -1.82
CSTF3Q12996 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.71□□□□□ -1.82
CSTF3Q12996 OR4K11P-201ENST00000431829 904 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 AC109583.1-201ENST00000432156 268 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.71□□□□□ -1.82
CSTF3Q12996 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.71□□□□□ -1.82
CSTF3Q12996 MTND2P4-201ENST00000445034 1004 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 GDI2P2-201ENST00000445131 608 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 RAC1P7-201ENST00000445367 377 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 AC114755.5-201ENST00000447760 831 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.71□□□□□ -1.82
CSTF3Q12996 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.71□□□□□ -1.82
CSTF3Q12996 AP1S2P1-201ENST00000457344 379 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.71□□□□□ -1.82
CSTF3Q12996 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.71□□□□□ -1.82
CSTF3Q12996 AC084198.1-201ENST00000477747 402 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 AL024509.2-201ENST00000493462 493 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 AF131216.2-201ENST00000512316 564 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.71□□□□□ -1.82
CSTF3Q12996 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.71□□□□□ -1.82
CSTF3Q12996 AC025881.1-201ENST00000518851 512 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.71□□□□□ -1.82
CSTF3Q12996 SUMO2P20-201ENST00000520803 283 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 MTND4LP18-201ENST00000526864 291 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 HIGD1AP10-201ENST00000527837 282 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.71□□□□□ -1.82
CSTF3Q12996 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.71□□□□□ -1.82
CSTF3Q12996 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.71□□□□□ -1.82
CSTF3Q12996 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CSTF3Q12996 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
CSTF3Q12996 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.71□□□□□ -1.82
CSTF3Q12996 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.71□□□□□ -1.82
CSTF3Q12996 AL391497.1-201ENST00000608671 547 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 MIR6867-201ENST00000610636 67 ntBASIC3.71□□□□□ -1.82
CSTF3Q12996 AC112484.5-201ENST00000624189 228 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms