Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.35□□□□□ -1.87
CNTN1Q12860 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.35□□□□□ -1.87
CNTN1Q12860 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.35□□□□□ -1.87
CNTN1Q12860 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.35□□□□□ -1.87
CNTN1Q12860 HMGB1P25-201ENST00000468402 607 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 AC087312.1-201ENST00000471411 480 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 MTND2P14-201ENST00000482139 351 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 RN7SL504P-201ENST00000494496 287 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 AP001086.1-201ENST00000494882 321 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 AC078918.1-201ENST00000498515 228 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.35□□□□□ -1.87
CNTN1Q12860 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.35□□□□□ -1.87
CNTN1Q12860 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.35□□□□□ -1.87
CNTN1Q12860 ARL2BPP6-201ENST00000512757 439 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.35□□□□□ -1.87
CNTN1Q12860 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.35□□□□□ -1.87
CNTN1Q12860 HIGD1AP10-201ENST00000527837 282 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.35□□□□□ -1.87
CNTN1Q12860 OR4P1P-201ENST00000530808 1136 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.35□□□□□ -1.87
CNTN1Q12860 EEF1B2P4-201ENST00000551398 348 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.35□□□□□ -1.87
CNTN1Q12860 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.35□□□□□ -1.87
CNTN1Q12860 ZNF415P1-201ENST00000582279 1166 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.35□□□□□ -1.87
CNTN1Q12860 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.35□□□□□ -1.87
CNTN1Q12860 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.35□□□□□ -1.87
CNTN1Q12860 AC080013.4-201ENST00000607624 649 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 AL592295.2-201ENST00000612578 206 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 AL139418.1-201ENST00000613613 177 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 MIR8057-201ENST00000620957 69 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 AC004009.2-201ENST00000623016 728 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CNTN1Q12860 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CNTN1Q12860 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CNTN1Q12860 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.35□□□□□ -1.87
CNTN1Q12860 AL157700.1-201ENST00000561973 1432 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 OR4G11P-202ENST00000642116 1414 ntBASIC3.35□□□□□ -1.87
CNTN1Q12860 CR383658.2-201ENST00000547576 1525 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CNTN1Q12860 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CNTN1Q12860 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNTN1Q12860 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNTN1Q12860 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNTN1Q12860 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNTN1Q12860 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNTN1Q12860 RNU6-1249P-201ENST00000363237 111 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 RNA5SP167-201ENST00000365461 116 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 RNU6-629P-201ENST00000384061 103 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CNTN1Q12860 MTND4P13-201ENST00000402078 1023 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 AL357075.1-201ENST00000404107 726 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 USP9YP33-201ENST00000412220 421 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CNTN1Q12860 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 MTCYBP38-201ENST00000417160 1123 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.34□□□□□ -1.87
CNTN1Q12860 TOMM22P1-201ENST00000418578 312 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 AIMP1P1-201ENST00000418670 937 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 AL953862.1-201ENST00000423016 168 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 AC010099.3-201ENST00000423896 409 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.34□□□□□ -1.87
CNTN1Q12860 USP9YP35-201ENST00000435696 412 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 AC006028.1-201ENST00000438379 402 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.34□□□□□ -1.87
CNTN1Q12860 NPM1P49-201ENST00000448027 714 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 RSL24D1P3-201ENST00000449255 495 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 PHBP14-201ENST00000512887 367 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CNTN1Q12860 AP004371.1-201ENST00000525240 214 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.34□□□□□ -1.87
CNTN1Q12860 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.34□□□□□ -1.87
CNTN1Q12860 LRRC34P1-201ENST00000542742 915 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 AC012493.2-201ENST00000595083 291 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 AL031281.1-201ENST00000604049 488 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 AC112220.3-201ENST00000605502 502 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.34□□□□□ -1.87
CNTN1Q12860 AC099778.2-201ENST00000610904 211 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 AC018755.4-201ENST00000619715 454 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.34□□□□□ -1.87
CNTN1Q12860 AP002791.1-201ENST00000623291 381 ntBASIC3.34□□□□□ -1.87
CNTN1Q12860 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.34□□□□□ -1.87
CNTN1Q12860 AC093908.1-201ENST00000623125 8092 ntBASIC3.34□□□□□ -1.88
CNTN1Q12860 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.34□□□□□ -1.88
CNTN1Q12860 AC010733.2-201ENST00000589496 5702 ntBASIC3.34□□□□□ -1.88
CNTN1Q12860 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.34□□□□□ -1.88
CNTN1Q12860 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CNTN1Q12860 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CNTN1Q12860 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CNTN1Q12860 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CNTN1Q12860 SNORD51-201ENST00000384320 80 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.33□□□□□ -1.88
CNTN1Q12860 RN7SKP285-201ENST00000410137 318 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.33□□□□□ -1.88
CNTN1Q12860 EI24P1-201ENST00000416584 867 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.33□□□□□ -1.88
CNTN1Q12860 AC019178.2-201ENST00000423595 505 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AL512649.1-201ENST00000428997 581 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AC008264.1-201ENST00000447612 367 ntBASIC3.33□□□□□ -1.88
CNTN1Q12860 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms