Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MTCO1P24-201ENST00000515438 1558 ntBASIC5.21□□□□□ -1.57
PCDH1Q08174 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.21□□□□□ -1.57
PCDH1Q08174 AC027287.1-201ENST00000553115 1453 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
PCDH1Q08174 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.21□□□□□ -1.58
PCDH1Q08174 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH1Q08174 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH1Q08174 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH1Q08174 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDH1Q08174 RPL21P109-201ENST00000422213 475 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 DPH3P2-201ENST00000422618 250 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 HIGD1AP11-201ENST00000438361 280 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH1Q08174 AL391987.1-201ENST00000441025 200 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 MTCO3P45-201ENST00000443036 613 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 AP000281.1-201ENST00000444036 316 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDH1Q08174 AL162389.1-201ENST00000449233 177 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDH1Q08174 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH1Q08174 PPIAP21-201ENST00000464473 501 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 AC117503.1-201ENST00000472241 394 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 AC103987.1-201ENST00000473394 348 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH1Q08174 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH1Q08174 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDH1Q08174 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDH1Q08174 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH1Q08174 RN7SKP277-201ENST00000516895 283 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH1Q08174 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDH1Q08174 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH1Q08174 AC027369.5-201ENST00000533838 755 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 AC022404.1-201ENST00000555320 273 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH1Q08174 FO393422.1-201ENST00000603908 708 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 AC104695.3-201ENST00000604052 296 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 AL158032.1-201ENST00000605401 106 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 MIR6768-201ENST00000610734 72 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 AL691477.1-201ENST00000624398 162 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDH1Q08174 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDH1Q08174 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDH1Q08174 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDH1Q08174 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH1Q08174 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PCDH1Q08174 AL078621.3-201ENST00000623707 2042 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 AC104964.3-201ENST00000606115 2860 ntBASIC5.21□□□□□ -1.58
PCDH1Q08174 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH1Q08174 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH1Q08174 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH1Q08174 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDH1Q08174 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH1Q08174 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PCDH1Q08174 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDH1Q08174 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH1Q08174 AL138820.1-201ENST00000617901 5305 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH1Q08174 AC005592.1-201ENST00000566527 1640 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 AL158163.1-201ENST00000603915 1649 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 RNU1-19P-201ENST00000363306 165 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 RNU6-715P-201ENST00000365204 103 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH1Q08174 RNU6-701P-201ENST00000384059 107 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 Y_RNA.556-201ENST00000384677 113 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 MT-TC-201ENST00000387405 66 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDH1Q08174 RNA5SP111-201ENST00000411386 101 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH1Q08174 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH1Q08174 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH1Q08174 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDH1Q08174 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH1Q08174 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH1Q08174 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH1Q08174 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH1Q08174 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDH1Q08174 AC092754.1-201ENST00000472975 479 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 RN7SL174P-201ENST00000475578 289 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 AC010655.3-201ENST00000478818 450 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 AC026801.1-201ENST00000497178 464 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 AC116655.1-201ENST00000508324 901 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDH1Q08174 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH1Q08174 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.2□□□□□ -1.58
PCDH1Q08174 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH1Q08174 RNU6-323P-201ENST00000521915 107 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 OR10G5P-201ENST00000532733 358 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 GNAI2P1-201ENST00000541815 315 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH1Q08174 AC040958.1-201ENST00000561102 201 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH1Q08174 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH1Q08174 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH1Q08174 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH1Q08174 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDH1Q08174 DDX10P1-201ENST00000448545 1933 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH1Q08174 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PCDH1Q08174 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms