Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCN1BQ07699 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SCN1BQ07699 RSL24D1P4-201ENST00000400938 484 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 RN7SKP266-201ENST00000410232 287 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCN1BQ07699 AC245054.1-201ENST00000420944 258 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.31□□□□□ -1.88
SCN1BQ07699 AL022400.1-201ENST00000423946 935 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.31□□□□□ -1.88
SCN1BQ07699 TBCAP1-201ENST00000436520 327 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.31□□□□□ -1.88
SCN1BQ07699 AL132838.2-201ENST00000492041 314 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 RPL30P5-201ENST00000494923 336 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.31□□□□□ -1.88
SCN1BQ07699 AC110768.1-201ENST00000509222 400 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 HSPE1P23-201ENST00000509838 286 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 TTC39CP1-201ENST00000512513 755 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 PHBP14-201ENST00000512887 367 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 MTND5P4-201ENST00000514978 288 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.31□□□□□ -1.88
SCN1BQ07699 RN7SKP265-201ENST00000516448 223 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 RNU6-1256P-201ENST00000516539 103 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.31□□□□□ -1.88
SCN1BQ07699 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.31□□□□□ -1.88
SCN1BQ07699 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SCN1BQ07699 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.31□□□□□ -1.88
SCN1BQ07699 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.31□□□□□ -1.88
SCN1BQ07699 AC023161.2-201ENST00000551218 780 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 MTND1P24-201ENST00000552175 861 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.31□□□□□ -1.88
SCN1BQ07699 AC005951.2-201ENST00000576282 495 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.31□□□□□ -1.88
SCN1BQ07699 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SCN1BQ07699 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.31□□□□□ -1.88
SCN1BQ07699 AL031985.2-201ENST00000600955 480 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 AC025588.2-201ENST00000604851 466 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 AC105148.1-201ENST00000604961 409 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 SNORA51-201ENST00000606420 132 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 RNU4-89P-201ENST00000607443 133 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 AP000240.1-201ENST00000609910 452 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 AC112484.5-201ENST00000624189 228 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 PCMTD1P7-201ENST00000634506 357 ntBASIC3.31□□□□□ -1.88
SCN1BQ07699 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SCN1BQ07699 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.31□□□□□ -1.88
SCN1BQ07699 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCN1BQ07699 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SCN1BQ07699 AL513302.2-201ENST00000562313 1842 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCN1BQ07699 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCN1BQ07699 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCN1BQ07699 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCN1BQ07699 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SCN1BQ07699 AL121657.1-201ENST00000327215 531 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 RPL32P3-201ENST00000359025 275 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SCN1BQ07699 SNORD113-6-201ENST00000363345 75 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 RNU4-28P-201ENST00000364739 141 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 SNORA14A-201ENST00000364773 135 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 SNORA73.2-201ENST00000364946 201 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 RNU6-805P-201ENST00000365643 106 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 RNU1-39P-201ENST00000383897 165 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 SNORA48.8-201ENST00000391324 134 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 AC016397.1-201ENST00000412463 242 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 AC017079.2-201ENST00000416102 485 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.3□□□□□ -1.88
SCN1BQ07699 NDUFB4P7-201ENST00000423198 363 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 AL356867.1-201ENST00000429623 299 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.3□□□□□ -1.88
SCN1BQ07699 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.3□□□□□ -1.88
SCN1BQ07699 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCN1BQ07699 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.3□□□□□ -1.88
SCN1BQ07699 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.3□□□□□ -1.88
SCN1BQ07699 AL031183.1-201ENST00000457667 207 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 RPL21P11-201ENST00000461458 483 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 RN7SL330P-201ENST00000469709 307 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 NDUFA5P9-201ENST00000472609 340 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 RN7SL442P-201ENST00000473804 320 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.3□□□□□ -1.88
SCN1BQ07699 AP000867.2-201ENST00000532468 320 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 AC004024.1-201ENST00000549244 247 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.3□□□□□ -1.88
SCN1BQ07699 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.3□□□□□ -1.88
SCN1BQ07699 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCN1BQ07699 AC136618.2-201ENST00000575091 400 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 AC060771.1-201ENST00000582031 164 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.3□□□□□ -1.88
SCN1BQ07699 BNIP3P23-201ENST00000599655 511 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 AC234772.3-201ENST00000602277 528 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.3□□□□□ -1.88
SCN1BQ07699 AC013244.3-201ENST00000605614 388 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 AC097468.3-201ENST00000607956 456 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 AC092653.1-201ENST00000608509 531 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 BX323046.1-201ENST00000610145 535 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 MIR6758-201ENST00000620653 63 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 AC019226.1-201ENST00000625666 515 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 MIR6830-201ENST00000636015 70 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.3□□□□□ -1.88
SCN1BQ07699 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCN1BQ07699 AC005183.1-201ENST00000603687 1979 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms