Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.49□□□□□ -1.85
GABPAQ06546 RN7SKP31-201ENST00000516354 278 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 SNORA64.4-201ENST00000516632 81 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.49□□□□□ -1.85
GABPAQ06546 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.49□□□□□ -1.85
GABPAQ06546 AADACP1-206ENST00000561502 1193 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 AL132657.2-201ENST00000564417 358 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.49□□□□□ -1.85
GABPAQ06546 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.49□□□□□ -1.85
GABPAQ06546 AC006504.3-201ENST00000586818 523 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 AC010928.3-201ENST00000587712 541 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.49□□□□□ -1.85
GABPAQ06546 AC009974.1-201ENST00000608881 455 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 MIR6852-201ENST00000621699 66 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 AL078595.3-201ENST00000623815 1166 ntBASIC3.49□□□□□ -1.85
GABPAQ06546 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
GABPAQ06546 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
GABPAQ06546 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GABPAQ06546 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
GABPAQ06546 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.48□□□□□ -1.85
GABPAQ06546 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GABPAQ06546 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
GABPAQ06546 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
GABPAQ06546 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
GABPAQ06546 AC099786.3-201ENST00000565735 1410 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 RNU6-989P-201ENST00000362756 107 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 U3.11-201ENST00000364476 212 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 SNORA72.3-201ENST00000365074 132 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
GABPAQ06546 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.48□□□□□ -1.85
GABPAQ06546 RNU6-851P-201ENST00000384565 107 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.48□□□□□ -1.85
GABPAQ06546 AL513175.2-201ENST00000422071 443 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.48□□□□□ -1.85
GABPAQ06546 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.48□□□□□ -1.85
GABPAQ06546 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.48□□□□□ -1.85
GABPAQ06546 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.48□□□□□ -1.85
GABPAQ06546 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
GABPAQ06546 AL136097.1-201ENST00000456945 913 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 RN7SL442P-201ENST00000473804 320 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
GABPAQ06546 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.48□□□□□ -1.85
GABPAQ06546 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.48□□□□□ -1.85
GABPAQ06546 AC091826.1-201ENST00000514065 313 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 AC090136.1-201ENST00000520009 240 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.48□□□□□ -1.85
GABPAQ06546 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.48□□□□□ -1.85
GABPAQ06546 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.48□□□□□ -1.85
GABPAQ06546 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.48□□□□□ -1.85
GABPAQ06546 LARP7P2-201ENST00000575306 125 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.48□□□□□ -1.85
GABPAQ06546 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.48□□□□□ -1.85
GABPAQ06546 BNIP3P26-201ENST00000600827 554 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 MTND2P41-201ENST00000637599 773 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 MIR7153-201ENST00000637758 57 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 SRP72P2-201ENST00000344851 1979 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 AP003122.5-201ENST00000527668 3766 ntBASIC3.48□□□□□ -1.85
GABPAQ06546 CDR1-202ENST00000625883 1485 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 GDI2P1-201ENST00000429312 1336 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GABPAQ06546 AF127577.6-201ENST00000623352 2191 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 FAM35BP-202ENST00000497389 3337 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
GABPAQ06546 SNORA18.3-201ENST00000384122 132 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 RNU6-906P-201ENST00000384700 70 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 RNU6-837P-201ENST00000391056 108 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 ERHP2-201ENST00000402323 299 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 AL590084.1-201ENST00000407885 387 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.47□□□□□ -1.85
GABPAQ06546 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.47□□□□□ -1.85
GABPAQ06546 RPL32P35-201ENST00000415214 394 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GABPAQ06546 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.47□□□□□ -1.85
GABPAQ06546 AC092427.1-201ENST00000439177 601 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 AC093156.1-201ENST00000440382 670 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.47□□□□□ -1.85
GABPAQ06546 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.47□□□□□ -1.85
GABPAQ06546 RPS20P24-201ENST00000457473 361 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 AC078785.3-201ENST00000476607 425 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.47□□□□□ -1.85
GABPAQ06546 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.47□□□□□ -1.85
GABPAQ06546 RN7SKP132-201ENST00000516001 208 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 AC005832.3-201ENST00000537929 631 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.47□□□□□ -1.85
GABPAQ06546 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.47□□□□□ -1.85
GABPAQ06546 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.47□□□□□ -1.85
GABPAQ06546 CYCSP39-201ENST00000565821 309 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
GABPAQ06546 MIR4672-201ENST00000583126 81 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.47□□□□□ -1.85
GABPAQ06546 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.47□□□□□ -1.85
GABPAQ06546 SNRPGP15-201ENST00000600149 222 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.47□□□□□ -1.85
GABPAQ06546 AC120349.2-201ENST00000625002 298 ntBASIC3.47□□□□□ -1.85
GABPAQ06546 GABPAP-201ENST00000419271 1356 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms