Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AL031601.2-202ENST00000622650 282 ntBASIC1.68□□□□□ -2.14
SSBP1Q04837 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.68□□□□□ -2.14
SSBP1Q04837 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.68□□□□□ -2.14
SSBP1Q04837 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
SSBP1Q04837 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.68□□□□□ -2.14
SSBP1Q04837 AC073346.2-201ENST00000624724 2058 ntBASIC1.68□□□□□ -2.14
SSBP1Q04837 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.68□□□□□ -2.14
SSBP1Q04837 CENPCP1-201ENST00000533085 2578 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.67□□□□□ -2.14
SSBP1Q04837 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SSBP1Q04837 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.67□□□□□ -2.14
SSBP1Q04837 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SSBP1Q04837 SNORA36C-201ENST00000384289 132 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SSBP1Q04837 SNORA11.4-201ENST00000408823 129 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 AL030996.1-201ENST00000411430 235 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.67□□□□□ -2.14
SSBP1Q04837 AC008280.1-201ENST00000418851 412 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 AC114973.1-201ENST00000429057 632 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.67□□□□□ -2.14
SSBP1Q04837 RBM43P1-201ENST00000476891 1081 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC1.67□□□□□ -2.14
SSBP1Q04837 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.67□□□□□ -2.14
SSBP1Q04837 AC006499.2-201ENST00000513470 337 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 AC016065.2-201ENST00000514530 444 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 AC034244.2-201ENST00000514668 858 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 RNU4-29P-201ENST00000515943 174 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 RNU6-1004P-201ENST00000516584 111 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.67□□□□□ -2.14
SSBP1Q04837 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SSBP1Q04837 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.67□□□□□ -2.14
SSBP1Q04837 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC1.67□□□□□ -2.14
SSBP1Q04837 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.67□□□□□ -2.14
SSBP1Q04837 AC008083.4-201ENST00000615076 444 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 AC007275.1-201ENST00000621243 671 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 AC025034.2-201ENST00000623264 286 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 AC103798.2-201ENST00000624292 632 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.67□□□□□ -2.14
SSBP1Q04837 AC103710.2-202ENST00000641454 2853 ntBASIC1.67□□□□□ -2.14
SSBP1Q04837 AC135776.4-201ENST00000624300 1904 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 RNU6-7-201ENST00000364784 107 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 RNU6-8-201ENST00000365467 107 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 MIR670-201ENST00000390142 98 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SSBP1Q04837 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SSBP1Q04837 MTCO3P4-201ENST00000419236 787 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.66□□□□□ -2.14
SSBP1Q04837 AL606495.1-201ENST00000422100 813 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 AC027124.2-201ENST00000428249 105 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 AL513175.1-201ENST00000431492 780 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 NDUFA5P10-201ENST00000432147 357 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.66□□□□□ -2.14
SSBP1Q04837 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.66□□□□□ -2.14
SSBP1Q04837 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.66□□□□□ -2.14
SSBP1Q04837 MRPL42P6-201ENST00000486397 371 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.66□□□□□ -2.14
SSBP1Q04837 CCNHP1-201ENST00000513311 678 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 SNORA31.20-201ENST00000517111 133 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 IGKV3-31-201ENST00000523109 329 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 COX6CP5-201ENST00000527162 228 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.66□□□□□ -2.14
SSBP1Q04837 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.66□□□□□ -2.14
SSBP1Q04837 HMGB1P6-201ENST00000569046 646 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 AC245036.5-201ENST00000596330 847 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 NRBF2P5-201ENST00000603087 788 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 AC009220.3-201ENST00000604318 586 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 NUTF2P8-201ENST00000604593 363 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 AC096577.2-201ENST00000611455 153 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.66□□□□□ -2.14
SSBP1Q04837 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
SSBP1Q04837 ZNF734P-201ENST00000419494 1534 ntBASIC1.66□□□□□ -2.14
SSBP1Q04837 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
SSBP1Q04837 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.14
SSBP1Q04837 SNORA6-201ENST00000384033 151 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 BTF3P7-201ENST00000407097 488 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 Z99127.2-201ENST00000441426 334 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 RPS26P56-201ENST00000444468 240 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 BUD31P2-201ENST00000449374 300 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 AL031183.1-201ENST00000457667 207 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.65□□□□□ -2.15
SSBP1Q04837 AC015908.1-201ENST00000478739 476 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SSBP1Q04837 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SSBP1Q04837 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.65□□□□□ -2.15
SSBP1Q04837 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.65□□□□□ -2.15
SSBP1Q04837 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.65□□□□□ -2.15
SSBP1Q04837 AP003385.6-201ENST00000531603 374 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 AC027176.1-201ENST00000560204 514 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 AC026464.5-201ENST00000562497 722 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 MIR5089-201ENST00000580047 84 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 AC092474.3-201ENST00000603022 568 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 AC024220.1-201ENST00000603675 484 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 AC007938.3-201ENST00000604965 623 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 AL442067.2-201ENST00000614033 363 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 U73479.1-201ENST00000618062 168 ntBASIC1.65□□□□□ -2.15
SSBP1Q04837 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.65□□□□□ -2.15
SSBP1Q04837 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.65□□□□□ -2.15
SSBP1Q04837 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms