Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RNU6-362P-201ENST00000516736 90 ntBASIC3.26□□□□□ -1.89
CCNA1P78396 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.26□□□□□ -1.89
CCNA1P78396 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.26□□□□□ -1.89
CCNA1P78396 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.26□□□□□ -1.89
CCNA1P78396 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.26□□□□□ -1.89
CCNA1P78396 AC231759.1-201ENST00000616455 597 ntBASIC3.26□□□□□ -1.89
CCNA1P78396 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.26□□□□□ -1.89
CCNA1P78396 AC091564.4-201ENST00000533934 2194 ntBASIC3.26□□□□□ -1.89
CCNA1P78396 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.26□□□□□ -1.89
CCNA1P78396 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCNA1P78396 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCNA1P78396 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.25□□□□□ -1.89
CCNA1P78396 NUP58P1-201ENST00000502546 1738 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCNA1P78396 RNU6-115P-201ENST00000364310 107 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 RNA5SP139-201ENST00000364340 117 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCNA1P78396 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.25□□□□□ -1.89
CCNA1P78396 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCNA1P78396 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCNA1P78396 AL138827.1-201ENST00000402666 306 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCNA1P78396 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 GTF2IP23-201ENST00000423746 351 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.25□□□□□ -1.89
CCNA1P78396 ARL5AP4-201ENST00000430731 512 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 MTND2P3-201ENST00000452458 470 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 RPS27P29-201ENST00000463110 252 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 RPS26P21-201ENST00000475397 348 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.25□□□□□ -1.89
CCNA1P78396 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.25□□□□□ -1.89
CCNA1P78396 OR5H3P-201ENST00000502817 919 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 AC006445.2-201ENST00000510061 472 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 AC026616.1-201ENST00000523157 525 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.25□□□□□ -1.89
CCNA1P78396 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.25□□□□□ -1.89
CCNA1P78396 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.25□□□□□ -1.89
CCNA1P78396 AC009097.3-201ENST00000563557 1018 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 AC034268.2-201ENST00000571784 482 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 AC090666.1-201ENST00000578241 445 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 DUXAP4-201ENST00000603046 613 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.25□□□□□ -1.89
CCNA1P78396 AC090617.7-201ENST00000623952 126 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 AC106730.3-201ENST00000624568 641 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CCNA1P78396 AP003122.5-201ENST00000527668 3766 ntBASIC3.25□□□□□ -1.89
CCNA1P78396 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCNA1P78396 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCNA1P78396 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.25□□□□□ -1.89
CCNA1P78396 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCNA1P78396 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CCNA1P78396 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CCNA1P78396 RNU6-805P-201ENST00000365643 106 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 U3.42-201ENST00000408746 214 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 RNA5SP293-201ENST00000410527 113 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.24□□□□□ -1.89
CCNA1P78396 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.24□□□□□ -1.89
CCNA1P78396 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.24□□□□□ -1.89
CCNA1P78396 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 AL645638.1-201ENST00000440519 361 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 AC125238.1-201ENST00000448842 249 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 NAP1L1P3-201ENST00000462291 880 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 AP001025.2-201ENST00000490908 477 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 AC093767.1-201ENST00000504523 156 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 TXNP6-201ENST00000510190 310 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCNA1P78396 OR4P1P-201ENST00000530808 1136 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.24□□□□□ -1.89
CCNA1P78396 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.24□□□□□ -1.89
CCNA1P78396 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.24□□□□□ -1.89
CCNA1P78396 TRAV37-201ENST00000553906 342 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 AC104984.5-201ENST00000586878 94 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 GAS5-AS1-201ENST00000602767 694 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.24□□□□□ -1.89
CCNA1P78396 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.24□□□□□ -1.89
CCNA1P78396 DBF4P1-201ENST00000412976 1892 ntBASIC3.24□□□□□ -1.89
CCNA1P78396 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.23□□□□□ -1.89
CCNA1P78396 MIR34A-201ENST00000385130 110 ntBASIC3.23□□□□□ -1.89
CCNA1P78396 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.23□□□□□ -1.89
CCNA1P78396 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCNA1P78396 RNA5SP21-201ENST00000410917 96 ntBASIC3.23□□□□□ -1.89
CCNA1P78396 AL592148.1-201ENST00000413568 445 ntBASIC3.23□□□□□ -1.89
CCNA1P78396 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.23□□□□□ -1.89
CCNA1P78396 MTND4LP10-201ENST00000435146 291 ntBASIC3.23□□□□□ -1.89
CCNA1P78396 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.23□□□□□ -1.89
CCNA1P78396 NDUFA5P7-201ENST00000452914 242 ntBASIC3.23□□□□□ -1.89
CCNA1P78396 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.23□□□□□ -1.89
CCNA1P78396 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.23□□□□□ -1.89
CCNA1P78396 KCTD9P5-201ENST00000504141 1170 ntBASIC3.23□□□□□ -1.89
CCNA1P78396 AC010468.3-201ENST00000508225 458 ntBASIC3.23□□□□□ -1.89
CCNA1P78396 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.23□□□□□ -1.89
CCNA1P78396 SNORA31.26-201ENST00000517250 137 ntBASIC3.23□□□□□ -1.89
CCNA1P78396 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.23□□□□□ -1.89
CCNA1P78396 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.23□□□□□ -1.89
CCNA1P78396 AC106900.2-201ENST00000604994 317 ntBASIC3.23□□□□□ -1.89
CCNA1P78396 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.23□□□□□ -1.89
CCNA1P78396 AL118508.4-201ENST00000624142 1176 ntBASIC3.23□□□□□ -1.89
CCNA1P78396 AP000676.4-201ENST00000624659 623 ntBASIC3.23□□□□□ -1.89
CCNA1P78396 AC011460.1-201ENST00000636268 1834 ntBASIC3.23□□□□□ -1.89
CCNA1P78396 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms