Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
ABCA4P78363 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.87□□□□□ -2.11
ABCA4P78363 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.87□□□□□ -2.11
ABCA4P78363 RPS27P5-201ENST00000444247 244 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 HMGN2P21-201ENST00000447764 270 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 AL118520.1-201ENST00000450770 291 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 ARPC3P2-201ENST00000457786 533 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 AC008571.1-201ENST00000467232 300 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ABCA4P78363 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.87□□□□□ -2.11
ABCA4P78363 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.87□□□□□ -2.11
ABCA4P78363 CCNHP1-201ENST00000513311 678 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.87□□□□□ -2.11
ABCA4P78363 PCNAP1-202ENST00000595299 752 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ABCA4P78363 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
ABCA4P78363 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.87□□□□□ -2.11
ABCA4P78363 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
ABCA4P78363 SNORA67.3-201ENST00000384366 140 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 MIR221-201ENST00000385135 110 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 RPL7P46-201ENST00000425129 740 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 AC098826.1-201ENST00000433943 471 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 HSPE1P28-201ENST00000443139 211 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.87□□□□□ -2.11
ABCA4P78363 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.87□□□□□ -2.11
ABCA4P78363 MTCYBP14-201ENST00000457471 715 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
ABCA4P78363 RN7SKP234-201ENST00000517173 224 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 AF279873.1-201ENST00000523393 313 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 MTCYBP20-201ENST00000524239 1129 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.87□□□□□ -2.11
ABCA4P78363 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.87□□□□□ -2.11
ABCA4P78363 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.87□□□□□ -2.11
ABCA4P78363 MIR4506-201ENST00000584693 77 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 AC090425.2-201ENST00000608818 501 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 AC139769.3-201ENST00000618383 175 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 CYP3A51P-201ENST00000633513 256 ntBASIC1.87□□□□□ -2.11
ABCA4P78363 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
ABCA4P78363 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ABCA4P78363 AL512646.1-201ENST00000269395 1077 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 SNORA40.18-201ENST00000391200 128 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 NPM1P10-201ENST00000398310 865 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 MUPP-201ENST00000438111 566 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 MTND3P6-201ENST00000485242 339 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 FAM92A1P2-202ENST00000504766 877 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.86□□□□□ -2.11
ABCA4P78363 SCARNA16.3-201ENST00000516595 184 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.86□□□□□ -2.11
ABCA4P78363 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.86□□□□□ -2.11
ABCA4P78363 MIR4474-201ENST00000579189 78 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 AP001521.1-201ENST00000609150 300 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 AC092447.7-201ENST00000422212 1621 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ABCA4P78363 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
ABCA4P78363 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
ABCA4P78363 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.86□□□□□ -2.11
ABCA4P78363 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
ABCA4P78363 RNA5SP456-201ENST00000364002 114 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ABCA4P78363 SPA17P1-201ENST00000416656 452 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 MTCO1P42-201ENST00000457379 726 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 RPL21P104-201ENST00000464143 478 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.86□□□□□ -2.11
ABCA4P78363 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.86□□□□□ -2.11
ABCA4P78363 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.86□□□□□ -2.11
ABCA4P78363 RNA5SP468-201ENST00000516782 93 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.86□□□□□ -2.11
ABCA4P78363 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.86□□□□□ -2.11
ABCA4P78363 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.86□□□□□ -2.11
ABCA4P78363 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.86□□□□□ -2.11
ABCA4P78363 CENPUP2-201ENST00000555897 1186 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 AC011468.4-201ENST00000603942 409 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 AC009570.1-201ENST00000609599 745 ntBASIC1.86□□□□□ -2.11
ABCA4P78363 ADAM3A-203ENST00000461344 2157 ntBASIC1.85□□□□□ -2.11
ABCA4P78363 AC007336.1-201ENST00000576365 3828 ntBASIC1.85□□□□□ -2.11
ABCA4P78363 AC073055.1-201ENST00000456901 1621 ntBASIC1.85□□□□□ -2.11
ABCA4P78363 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ABCA4P78363 AL354719.1-201ENST00000406535 843 ntBASIC1.85□□□□□ -2.11
ABCA4P78363 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.85□□□□□ -2.11
ABCA4P78363 AL139156.1-201ENST00000412785 841 ntBASIC1.85□□□□□ -2.11
ABCA4P78363 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.85□□□□□ -2.11
ABCA4P78363 AC073310.1-201ENST00000423226 1033 ntBASIC1.85□□□□□ -2.11
ABCA4P78363 AP000705.1-201ENST00000454567 350 ntBASIC1.85□□□□□ -2.11
ABCA4P78363 TRBV26-201ENST00000456572 344 ntBASIC1.85□□□□□ -2.11
ABCA4P78363 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.85□□□□□ -2.11
ABCA4P78363 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
ABCA4P78363 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.85□□□□□ -2.11
ABCA4P78363 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.85□□□□□ -2.11
ABCA4P78363 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.85□□□□□ -2.11
ABCA4P78363 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
ABCA4P78363 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
ABCA4P78363 AC006378.2-201ENST00000623178 2476 ntBASIC1.84□□□□□ -2.11
ABCA4P78363 U8.8-201ENST00000365399 135 ntBASIC1.84□□□□□ -2.11
ABCA4P78363 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.84□□□□□ -2.11
ABCA4P78363 MIR142-201ENST00000384835 87 ntBASIC1.84□□□□□ -2.11
ABCA4P78363 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ABCA4P78363 AC111000.5-201ENST00000506559 1178 ntBASIC1.84□□□□□ -2.11
ABCA4P78363 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ABCA4P78363 RNU6-826P-201ENST00000516827 104 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms