Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.42□□□□□ -2.02
ACTBP60709 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.42□□□□□ -2.02
ACTBP60709 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.42□□□□□ -2.02
ACTBP60709 SNORA74D-201ENST00000516404 141 ntBASIC2.42□□□□□ -2.02
ACTBP60709 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.42□□□□□ -2.02
ACTBP60709 AL133271.1-201ENST00000538229 291 ntBASIC2.42□□□□□ -2.02
ACTBP60709 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.42□□□□□ -2.02
ACTBP60709 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.42□□□□□ -2.02
ACTBP60709 MED28P6-201ENST00000558776 231 ntBASIC2.42□□□□□ -2.02
ACTBP60709 AC233266.2-201ENST00000567067 528 ntBASIC2.42□□□□□ -2.02
ACTBP60709 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.42□□□□□ -2.02
ACTBP60709 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.42□□□□□ -2.02
ACTBP60709 AC012254.4-201ENST00000588843 273 ntBASIC2.42□□□□□ -2.02
ACTBP60709 AP001542.1-201ENST00000591314 200 ntBASIC2.42□□□□□ -2.02
ACTBP60709 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.42□□□□□ -2.02
ACTBP60709 AL160281.1-201ENST00000605307 311 ntBASIC2.42□□□□□ -2.02
ACTBP60709 BX664608.1-201ENST00000610519 487 ntBASIC2.42□□□□□ -2.02
ACTBP60709 AC006329.2-201ENST00000611491 394 ntBASIC2.42□□□□□ -2.02
ACTBP60709 AL442067.2-201ENST00000614033 363 ntBASIC2.42□□□□□ -2.02
ACTBP60709 AC025588.4-201ENST00000615802 908 ntBASIC2.42□□□□□ -2.02
ACTBP60709 CYP3A51P-201ENST00000633513 256 ntBASIC2.42□□□□□ -2.02
ACTBP60709 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.41□□□□□ -2.02
ACTBP60709 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.41□□□□□ -2.02
ACTBP60709 Z82209.1-201ENST00000422141 2135 ntBASIC2.41□□□□□ -2.02
ACTBP60709 AC025263.3-201ENST00000622965 1396 ntBASIC2.41□□□□□ -2.02
ACTBP60709 RNA5SP374-201ENST00000362939 125 ntBASIC2.41□□□□□ -2.02
ACTBP60709 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.41□□□□□ -2.02
ACTBP60709 RNU6-730P-201ENST00000383954 104 ntBASIC2.41□□□□□ -2.02
ACTBP60709 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
ACTBP60709 ANAPC10P1-201ENST00000395991 556 ntBASIC2.41□□□□□ -2.02
ACTBP60709 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
ACTBP60709 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.41□□□□□ -2.02
ACTBP60709 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.41□□□□□ -2.02
ACTBP60709 AL158825.1-201ENST00000414735 521 ntBASIC2.41□□□□□ -2.02
ACTBP60709 RPL7L1P10-201ENST00000427790 463 ntBASIC2.41□□□□□ -2.02
ACTBP60709 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.41□□□□□ -2.02
ACTBP60709 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.41□□□□□ -2.02
ACTBP60709 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.41□□□□□ -2.02
ACTBP60709 AC129850.1-201ENST00000436203 508 ntBASIC2.41□□□□□ -2.02
ACTBP60709 RPS26P30-201ENST00000443431 335 ntBASIC2.41□□□□□ -2.02
ACTBP60709 AL671855.1-201ENST00000446875 1203 ntBASIC2.41□□□□□ -2.02
ACTBP60709 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ACTBP60709 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.41□□□□□ -2.02
ACTBP60709 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.41□□□□□ -2.02
ACTBP60709 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.41□□□□□ -2.02
ACTBP60709 AC003982.1-202ENST00000469928 248 ntBASIC2.41□□□□□ -2.02
ACTBP60709 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.41□□□□□ -2.02
ACTBP60709 NAMPTP2-201ENST00000505629 1115 ntBASIC2.41□□□□□ -2.02
ACTBP60709 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.41□□□□□ -2.02
ACTBP60709 AC008885.1-201ENST00000514930 301 ntBASIC2.41□□□□□ -2.02
ACTBP60709 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.41□□□□□ -2.02
ACTBP60709 AC060766.3-201ENST00000591442 263 ntBASIC2.41□□□□□ -2.02
ACTBP60709 NRBF2P5-201ENST00000603087 788 ntBASIC2.41□□□□□ -2.02
ACTBP60709 AC079791.1-201ENST00000605356 973 ntBASIC2.41□□□□□ -2.02
ACTBP60709 AC124312.4-201ENST00000605533 310 ntBASIC2.41□□□□□ -2.02
ACTBP60709 AC004852.3-201ENST00000614131 326 ntBASIC2.41□□□□□ -2.02
ACTBP60709 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.41□□□□□ -2.02
ACTBP60709 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.41□□□□□ -2.02
ACTBP60709 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ACTBP60709 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ACTBP60709 AC010680.1-201ENST00000590024 3590 ntBASIC2.4□□□□□ -2.03
ACTBP60709 SNORA67.1-201ENST00000364749 141 ntBASIC2.4□□□□□ -2.03
ACTBP60709 DEFA7P-201ENST00000382676 285 ntBASIC2.4□□□□□ -2.03
ACTBP60709 SNORA54-201ENST00000384281 123 ntBASIC2.4□□□□□ -2.03
ACTBP60709 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
ACTBP60709 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.4□□□□□ -2.03
ACTBP60709 AC009237.2-201ENST00000421358 284 ntBASIC2.4□□□□□ -2.03
ACTBP60709 RPL7P37-201ENST00000425095 738 ntBASIC2.4□□□□□ -2.03
ACTBP60709 AC234781.2-201ENST00000426370 994 ntBASIC2.4□□□□□ -2.03
ACTBP60709 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.4□□□□□ -2.03
ACTBP60709 OR4K11P-201ENST00000431829 904 ntBASIC2.4□□□□□ -2.03
ACTBP60709 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.4□□□□□ -2.03
ACTBP60709 AC004866.2-201ENST00000438285 481 ntBASIC2.4□□□□□ -2.03
ACTBP60709 HSFY3P-201ENST00000444242 1191 ntBASIC2.4□□□□□ -2.03
ACTBP60709 AC104073.1-201ENST00000451988 151 ntBASIC2.4□□□□□ -2.03
ACTBP60709 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.4□□□□□ -2.03
ACTBP60709 RPL23AP70-201ENST00000483361 460 ntBASIC2.4□□□□□ -2.03
ACTBP60709 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.4□□□□□ -2.03
ACTBP60709 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.4□□□□□ -2.03
ACTBP60709 AC025768.1-201ENST00000510057 267 ntBASIC2.4□□□□□ -2.03
ACTBP60709 TBCAP3-201ENST00000512475 312 ntBASIC2.4□□□□□ -2.03
ACTBP60709 RNA5SP367-201ENST00000516557 118 ntBASIC2.4□□□□□ -2.03
ACTBP60709 RNA5SP471-201ENST00000516971 106 ntBASIC2.4□□□□□ -2.03
ACTBP60709 AC009812.2-201ENST00000517657 457 ntBASIC2.4□□□□□ -2.03
ACTBP60709 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.4□□□□□ -2.03
ACTBP60709 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.4□□□□□ -2.03
ACTBP60709 PSMA2P1-201ENST00000526365 646 ntBASIC2.4□□□□□ -2.03
ACTBP60709 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.4□□□□□ -2.03
ACTBP60709 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.4□□□□□ -2.03
ACTBP60709 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.4□□□□□ -2.03
ACTBP60709 CKS1BP1-201ENST00000555221 240 ntBASIC2.4□□□□□ -2.03
ACTBP60709 HMGB1P14-201ENST00000557424 591 ntBASIC2.4□□□□□ -2.03
ACTBP60709 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.4□□□□□ -2.03
ACTBP60709 ATP5F1P7-201ENST00000567330 760 ntBASIC2.4□□□□□ -2.03
ACTBP60709 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.4□□□□□ -2.03
ACTBP60709 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.4□□□□□ -2.03
ACTBP60709 AC012493.2-201ENST00000595083 291 ntBASIC2.4□□□□□ -2.03
ACTBP60709 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.4□□□□□ -2.03
ACTBP60709 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.4□□□□□ -2.03
ACTBP60709 AC024153.1-201ENST00000603103 365 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms