Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PKNOX1P55347 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.93□□□□□ -1.94
PKNOX1P55347 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PKNOX1P55347 OR5BR1P-201ENST00000524992 1330 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PKNOX1P55347 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PKNOX1P55347 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PKNOX1P55347 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
PKNOX1P55347 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PKNOX1P55347 RNU6-216P-201ENST00000363282 104 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
PKNOX1P55347 RNU2-15P-201ENST00000410692 191 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.92□□□□□ -1.94
PKNOX1P55347 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.92□□□□□ -1.94
PKNOX1P55347 HSPE1P1-201ENST00000421494 318 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AC069157.1-201ENST00000421749 137 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AL353678.1-201ENST00000422735 741 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AC233728.2-201ENST00000425348 757 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AC005300.1-201ENST00000428401 373 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AC005326.1-201ENST00000429197 123 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AC104332.2-201ENST00000429959 156 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 MTND4LP10-201ENST00000435146 291 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PKNOX1P55347 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.92□□□□□ -1.94
PKNOX1P55347 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PKNOX1P55347 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.92□□□□□ -1.94
PKNOX1P55347 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.92□□□□□ -1.94
PKNOX1P55347 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.92□□□□□ -1.94
PKNOX1P55347 AC069528.1-202ENST00000482888 637 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.92□□□□□ -1.94
PKNOX1P55347 AC010376.1-201ENST00000522101 334 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AC007536.1-201ENST00000533382 349 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PKNOX1P55347 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.92□□□□□ -1.94
PKNOX1P55347 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.92□□□□□ -1.94
PKNOX1P55347 AL391156.1-201ENST00000554965 554 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PKNOX1P55347 MIR5680-201ENST00000577577 84 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.92□□□□□ -1.94
PKNOX1P55347 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.92□□□□□ -1.94
PKNOX1P55347 BNIP3P24-201ENST00000593398 557 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AL606834.2-201ENST00000602954 668 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 RPL23AP92-201ENST00000603609 255 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AC010738.1-201ENST00000604970 987 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AL109618.2-201ENST00000605527 211 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.92□□□□□ -1.94
PKNOX1P55347 AC005332.6-201ENST00000613178 446 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 Z99129.2-201ENST00000619967 314 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 AC007318.2-201ENST00000620999 243 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.92□□□□□ -1.94
PKNOX1P55347 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.92□□□□□ -1.94
PKNOX1P55347 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.92□□□□□ -1.94
PKNOX1P55347 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PKNOX1P55347 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.92□□□□□ -1.94
PKNOX1P55347 AC109315.1-201ENST00000584143 1347 ntBASIC2.92□□□□□ -1.94
PKNOX1P55347 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PKNOX1P55347 ZNF807-201ENST00000328088 1707 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PKNOX1P55347 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PKNOX1P55347 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PKNOX1P55347 MIR22-201ENST00000362190 85 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 RNU5E-10P-201ENST00000363506 118 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 RNU6-1074P-201ENST00000383995 104 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 SNRPEP2-201ENST00000397592 279 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 RPS3AP26-201ENST00000398259 784 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 AL356967.1-201ENST00000406305 431 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 RNA5SP344-201ENST00000411081 104 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 Z75741.2-201ENST00000417272 1167 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 RPL7P30-201ENST00000420888 709 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.91□□□□□ -1.94
PKNOX1P55347 PSMA6P3-201ENST00000428242 164 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 USP9YP22-201ENST00000438971 294 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PKNOX1P55347 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.91□□□□□ -1.94
PKNOX1P55347 RPL39P6-201ENST00000448289 150 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 FAM133DP-201ENST00000464802 691 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 RPS15AP17-201ENST00000470598 390 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 AC017015.1-201ENST00000477387 286 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 AC079203.1-201ENST00000487972 404 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.91□□□□□ -1.94
PKNOX1P55347 PRELID3BP6-201ENST00000503839 571 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 WBP1LP4-201ENST00000505043 344 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 AC096571.1-202ENST00000506634 735 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 AC006390.1-201ENST00000508068 283 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.91□□□□□ -1.94
PKNOX1P55347 RNU6-1095P-201ENST00000516148 108 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 RNA5SP76-201ENST00000516277 87 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 AC091163.3-201ENST00000518269 1144 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PKNOX1P55347 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.91□□□□□ -1.94
PKNOX1P55347 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.91□□□□□ -1.94
PKNOX1P55347 LRRC6P1-201ENST00000532188 885 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.91□□□□□ -1.94
PKNOX1P55347 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.91□□□□□ -1.94
PKNOX1P55347 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.91□□□□□ -1.94
PKNOX1P55347 AL157394.1-201ENST00000562983 1224 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 MTND3P13-201ENST00000574391 343 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.91□□□□□ -1.94
PKNOX1P55347 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms