Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.48□□□□□ -2.01
NUP98P52948 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.48□□□□□ -2.01
NUP98P52948 VN1R48P-201ENST00000448149 1036 ntBASIC2.48□□□□□ -2.01
NUP98P52948 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
NUP98P52948 RPL30P11-201ENST00000495304 339 ntBASIC2.48□□□□□ -2.01
NUP98P52948 RPS29P11-201ENST00000496507 171 ntBASIC2.48□□□□□ -2.01
NUP98P52948 OR52A4P-203ENST00000498233 1014 ntBASIC2.48□□□□□ -2.01
NUP98P52948 SNORD116-30-201ENST00000516468 85 ntBASIC2.48□□□□□ -2.01
NUP98P52948 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.48□□□□□ -2.01
NUP98P52948 AC091488.1-201ENST00000604239 660 ntBASIC2.48□□□□□ -2.01
NUP98P52948 AC099778.2-201ENST00000610904 211 ntBASIC2.48□□□□□ -2.01
NUP98P52948 AC011460.1-201ENST00000636268 1834 ntBASIC2.48□□□□□ -2.01
NUP98P52948 OR4G2P-202ENST00000641004 1759 ntBASIC2.48□□□□□ -2.01
NUP98P52948 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NUP98P52948 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NUP98P52948 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.47□□□□□ -2.01
NUP98P52948 MTCO3P30-201ENST00000426425 670 ntBASIC2.47□□□□□ -2.01
NUP98P52948 HMGB1P18-201ENST00000438801 619 ntBASIC2.47□□□□□ -2.01
NUP98P52948 FAM92A1P1-201ENST00000528023 890 ntBASIC2.47□□□□□ -2.01
NUP98P52948 AADACP1-206ENST00000561502 1193 ntBASIC2.47□□□□□ -2.01
NUP98P52948 SNRPGP19-201ENST00000603826 189 ntBASIC2.47□□□□□ -2.01
NUP98P52948 AC090425.2-201ENST00000608818 501 ntBASIC2.47□□□□□ -2.01
NUP98P52948 AC005156.1-201ENST00000613371 573 ntBASIC2.47□□□□□ -2.01
NUP98P52948 MIR7973-1-201ENST00000614683 76 ntBASIC2.47□□□□□ -2.01
NUP98P52948 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.47□□□□□ -2.01
NUP98P52948 AC006065.5-201ENST00000623427 349 ntBASIC2.47□□□□□ -2.01
NUP98P52948 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
NUP98P52948 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.47□□□□□ -2.01
NUP98P52948 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.47□□□□□ -2.01
NUP98P52948 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NUP98P52948 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.47□□□□□ -2.01
NUP98P52948 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.47□□□□□ -2.01
NUP98P52948 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
NUP98P52948 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
NUP98P52948 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
NUP98P52948 MIR583-201ENST00000384846 75 ntBASIC2.47□□□□□ -2.01
NUP98P52948 HNRNPDP2-201ENST00000406475 478 ntBASIC2.47□□□□□ -2.01
NUP98P52948 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.47□□□□□ -2.01
NUP98P52948 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.47□□□□□ -2.01
NUP98P52948 AL031663.1-201ENST00000437445 219 ntBASIC2.47□□□□□ -2.01
NUP98P52948 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.47□□□□□ -2.01
NUP98P52948 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.47□□□□□ -2.01
NUP98P52948 AC012181.1-201ENST00000479895 423 ntBASIC2.47□□□□□ -2.01
NUP98P52948 AC007182.2-201ENST00000489251 402 ntBASIC2.47□□□□□ -2.01
NUP98P52948 GZMAP1-201ENST00000503054 631 ntBASIC2.47□□□□□ -2.01
NUP98P52948 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
NUP98P52948 AC010265.1-201ENST00000513509 211 ntBASIC2.47□□□□□ -2.01
NUP98P52948 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.47□□□□□ -2.01
NUP98P52948 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.47□□□□□ -2.01
NUP98P52948 AC087241.2-201ENST00000535801 324 ntBASIC2.47□□□□□ -2.01
NUP98P52948 RPP40P2-201ENST00000603596 712 ntBASIC2.47□□□□□ -2.01
NUP98P52948 AL590410.1-201ENST00000617925 333 ntBASIC2.47□□□□□ -2.01
NUP98P52948 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
NUP98P52948 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NUP98P52948 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NUP98P52948 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.46□□□□□ -2.02
NUP98P52948 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.46□□□□□ -2.02
NUP98P52948 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.46□□□□□ -2.02
NUP98P52948 HMGB1P48-201ENST00000446155 598 ntBASIC2.46□□□□□ -2.02
NUP98P52948 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.46□□□□□ -2.02
NUP98P52948 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.46□□□□□ -2.02
NUP98P52948 RPL37P6-202ENST00000464216 403 ntBASIC2.46□□□□□ -2.02
NUP98P52948 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NUP98P52948 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.46□□□□□ -2.02
NUP98P52948 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.46□□□□□ -2.02
NUP98P52948 AC073387.2-201ENST00000604797 784 ntBASIC2.46□□□□□ -2.02
NUP98P52948 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.46□□□□□ -2.02
NUP98P52948 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.46□□□□□ -2.02
NUP98P52948 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
NUP98P52948 DNAJC19P6-201ENST00000401853 280 ntBASIC2.45□□□□□ -2.02
NUP98P52948 BTBD10P2-201ENST00000404779 676 ntBASIC2.45□□□□□ -2.02
NUP98P52948 Y_RNA.595-201ENST00000410403 105 ntBASIC2.45□□□□□ -2.02
NUP98P52948 RNU2-71P-201ENST00000411395 189 ntBASIC2.45□□□□□ -2.02
NUP98P52948 CYCSP49-201ENST00000420810 319 ntBASIC2.45□□□□□ -2.02
NUP98P52948 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.45□□□□□ -2.02
NUP98P52948 SDR42E1P3-201ENST00000438345 502 ntBASIC2.45□□□□□ -2.02
NUP98P52948 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.45□□□□□ -2.02
NUP98P52948 AC091917.2-201ENST00000505002 744 ntBASIC2.45□□□□□ -2.02
NUP98P52948 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NUP98P52948 AC069304.3-201ENST00000603938 1084 ntBASIC2.45□□□□□ -2.02
NUP98P52948 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.45□□□□□ -2.02
NUP98P52948 AC006378.2-201ENST00000623178 2476 ntBASIC2.45□□□□□ -2.02
NUP98P52948 HSPA8P4-201ENST00000511877 1920 ntBASIC2.45□□□□□ -2.02
NUP98P52948 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
NUP98P52948 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NUP98P52948 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.45□□□□□ -2.02
NUP98P52948 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.45□□□□□ -2.02
NUP98P52948 MTCO1P43-201ENST00000431831 488 ntBASIC2.45□□□□□ -2.02
NUP98P52948 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.45□□□□□ -2.02
NUP98P52948 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.45□□□□□ -2.02
NUP98P52948 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.45□□□□□ -2.02
NUP98P52948 AP000852.1-201ENST00000472460 573 ntBASIC2.45□□□□□ -2.02
NUP98P52948 AC017007.3-201ENST00000479865 435 ntBASIC2.45□□□□□ -2.02
NUP98P52948 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NUP98P52948 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.45□□□□□ -2.02
NUP98P52948 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.45□□□□□ -2.02
NUP98P52948 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.45□□□□□ -2.02
NUP98P52948 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NUP98P52948 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NUP98P52948 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms